Pairwise Alignments

Query, 380 a.a., DNA processing chain A from Agrobacterium fabrum C58

Subject, 365 a.a., putative Rossmann fold nucleotide-binding protein from Pseudomonas putida KT2440

 Score =  185 bits (470), Expect = 2e-51
 Identities = 134/380 (35%), Positives = 190/380 (50%), Gaps = 36/380 (9%)

Query: 3   HEETTRQGIELSARQRVAWLRLIRSDNIGPVTFRELINHFGSAEKALDA---------LP 53
           H  +     EL AR     LRL R  + G   FR L+  FGSA  AL A         +P
Sbjct: 4   HHSSPCPPAELEAR-----LRLHRLPDAGLRRFRTLLEAFGSASSALSAPASAWRALGIP 58

Query: 54  ELSKHGGSSRRLRIATPSEAEGEIETAEKFGARFIGIGEPDYPPALRQMDGAPPLIAMKG 113
           + +     S  +R      A   +   E+ G   +    P YP  L ++D APPL+ + G
Sbjct: 59  QATIDARRSAEVR----DGALAAMAWLERPGQHLLMWDGPGYPALLAEIDDAPPLLFVAG 114

Query: 114 SADAATRACVGIVGSRNASINGAKFAAMLARDCGRAGYSIASGLARGIDAAAHRASLATG 173
                 R  + IVGSR A+      A   +R   +AG++I SGLA G+D AAHRA+L  G
Sbjct: 115 EPALLDRPQLAIVGSRRATPPALDTARAFSRYLAQAGFTITSGLAVGVDGAAHRAALQAG 174

Query: 174 --TVAMLAGGLDRPYPQENFGLLQDIYDQGGATISEMPFGWEPRARDFPRRNRLIAGVSL 231
             T+A+L  GL + YPQ +  L Q + D G A +SE P    P   +FPRRNR+I+G+SL
Sbjct: 175 GGTIAVLGTGLQKLYPQRHRDLAQAMIDNGSALVSEYPLDAGPLPGNFPRRNRIISGLSL 234

Query: 232 GVVIVEAAERSGSLITARLAGEAGRLVFAVPGSPLDARCEGTNRLIKEGAMLTTGAADIL 291
           GV++VEA+  SGSLITARLA E GR V+A+PGS      +G ++LI++GA+L      IL
Sbjct: 235 GVLVVEASLASGSLITARLAAEQGREVYAIPGSIHHPGAKGCHQLIRDGALLVETVEQIL 294

Query: 292 EALRPLMEPQLPYDCKIEEPRSDEEMSPPGDDERSVIASALGPSPVEIDDIIRHTGFSAA 351
           E+L+           K + P                + + L  +P   + +   +    A
Sbjct: 295 ESLQGWQNLPPAVVDKFDHP----------------LLALLHAAPQTSESLAHCSEQPLA 338

Query: 352 AVHLVLLELDIAGRLNRHAG 371
            V   L EL++ GR++  AG
Sbjct: 339 DVLAQLTELELEGRVSNEAG 358