Pairwise Alignments

Query, 784 a.a., exoribonuclease from Agrobacterium fabrum C58

Subject, 818 a.a., ribonuclease R from Pectobacterium carotovorum WPP14

 Score =  362 bits (930), Expect = e-104
 Identities = 258/759 (33%), Positives = 379/759 (49%), Gaps = 40/759 (5%)

Query: 36  VPSREVLLKFIADHPQQASKREIAKAFGLKGENRI-VLKALLKELEVDG-MVHKSRKSLT 93
           +PSRE +L  IA      S+ E+A    L GE  +  L+  L+ +E DG ++   R+   
Sbjct: 18  IPSREYILAHIAKRDTPISREELAADLQLTGEEALEALRRRLRAMERDGQLIFTRRQCYA 77

Query: 94  RPGGLPPVTVLDITTRDKDGELIGRPAEWPEDMGAAPAVLIRQSSQDRGKKAPAAGLGDR 153
            P  L  +    I  RD  G L  R     +D+  +   + R      G  A A  LG  
Sbjct: 78  LPEKLDLLRGTVIGHRDGFGFL--RVEGRKDDLYLSAEEMKRTI---HGDVALAQPLG-- 130

Query: 154 ILAKIFPSKDTVGPAYTARVVKLIDRRQNALLGVFKQTEGGGGRLMPIDRR-GEEMVIDP 212
                    D  G     R+V++++ R   ++G +   + G G ++P D R   +++I  
Sbjct: 131 --------ADRKGRR-EGRIVRVLEPRTGQIVGRYF-VDAGVGFVVPDDSRLSFDILIPK 180

Query: 213 DGVGDAKDGDLIEVETSRNSGRYGLTRAKVLSVVGSVASEKAISMIAIYAHGIPHIFPPN 272
           + +  A+ G ++ VE ++ + R      K++ ++G          IA+  H IPH +PP 
Sbjct: 181 EEINGARMGFVVVVELTQRATRRTKAVGKIVEILGDNMGTGLAVDIALRTHDIPHTWPPK 240

Query: 273 VLAE----ADAAKAATMSHREDWRDLPLITIDPADAKDHDDAVYAELDPSPDNPDGVIVT 328
           V  +    ++    A    R D R LPL+TID  DA+D DDAV+ E    P    G  + 
Sbjct: 241 VEEQVKDLSEEVPEAAKKGRVDLRKLPLVTIDGEDARDFDDAVHCE----PKRGGGWRLW 296

Query: 329 VAIADVSWYVRPGAPLDREALKRGNSVYFPDRVVPMLPERISNDLCSLKEGVDRPALAVR 388
           VAIADVS+YVRP  PLD EA  RG SVYFP +VVPMLPE +SN LCSL   VDR  +   
Sbjct: 297 VAIADVSYYVRPNTPLDHEARARGTSVYFPSQVVPMLPEVLSNGLCSLNPQVDRLCMVCE 356

Query: 389 MTFSKEGRKASHTFHRIMMKSAAKLSYQQAQAAIDGNPDDKTGTLLEPI---LKPLWHAY 445
           MT S +G+ +S+ F+  +M S A+L+Y +    + G  D +     +P+   L+ L   Y
Sbjct: 357 MTVSAQGKLSSYKFYEAVMSSHARLTYTKVWHILQG--DAELREHYKPLVGGLEELHRMY 414

Query: 446 EVMKRGRDRRQPLELDMPERKIQLRPDGTVDKVVIPERLDAHKLIEEMMIQANVAAAETL 505
           + ++  R+ R  +  +  E K     +  +++V    R DAHKLIEE MI AN++AA+ +
Sbjct: 415 KALEHAREVRGGIAFETEEAKFIFNAERRIERVEAVVRNDAHKLIEECMILANISAAKFV 474

Query: 506 ETKKQRLVYRVHDAPTLSKQEVLREFLGTIGISMAKGVAMRANSFNGILARALDTPHQIM 565
           E  ++  ++RVHD P+      LR  LG +G+++  G+  +   +  ++    D P + M
Sbjct: 475 EKNEEPALFRVHDQPSEDHVLALRSVLGELGLTLKGGMKPQPKDYAELMNELADRPDREM 534

Query: 566 VNEMVLRSQSQAIYSPENIGHFGLNLMKYAHFTSPIRRYADLIVHRALVGSLG------L 619
           +  M+LRS  QAIY PEN GHFGL L  Y HFTSPIRRY DL +HRA+   L        
Sbjct: 535 LQTMLLRSMKQAIYDPENRGHFGLALTSYGHFTSPIRRYPDLSLHRAIKYLLSDRHERWT 594

Query: 620 GEGGITPQEEATLDDIAAEISTFERRAMAAERDTVNRLIAHHLSERVGEEFEGRVGGVTK 679
             GG        L  +    S  ERRA  A RD  + L    + + VGE F G +  VT 
Sbjct: 595 STGGWHSDINEML-QLGMHCSMTERRADEATRDVADWLKCDFMQDHVGEVFTGIIASVTG 653

Query: 680 AGLFVALPQFGADGFVPISTLGTDYFFYDEAHQALTGEKTGLGYQLGDTVQVRLAEAVPL 739
            G FV L     DG V +STL  DY+ YD   Q L GE  G  Y+LGD V++R+      
Sbjct: 654 FGFFVRLKDLFIDGLVHVSTLDNDYYRYDNIGQRLIGESRGQVYRLGDEVEIRVEAVHMD 713

Query: 740 AGALRFEMLSPGRKMPVGSRSFHKAGRRTSRPGAKPGTR 778
              + F ++S  RK+    ++     ++     AKP  R
Sbjct: 714 ERNIDFALISSTRKVRGEGKTARDRVKKPDSREAKPARR 752