Pairwise Alignments

Query, 784 a.a., exoribonuclease from Agrobacterium fabrum C58

Subject, 804 a.a., ribonuclease R from Kangiella aquimarina DSM 16071

 Score =  347 bits (889), Expect = 2e-99
 Identities = 242/714 (33%), Positives = 360/714 (50%), Gaps = 38/714 (5%)

Query: 36  VPSREVLLKFIADHPQQASKREIAKAFGLKGENRI-VLKALLKELEVDGMVHKSRKSLTR 94
           + SR+ +L+ + +  +  S  ++AK   +K   ++  L+  L  +E DG +  +RK    
Sbjct: 22  IASRQFILRQLEEANEPVSLDQLAKRLEMKEPEQVEALQKRLNAMERDGQLICNRK---- 77

Query: 95  PGGLPPVTVLDITT----RDKDGELIGRPAEWPEDMGAAPAVLIRQSSQDRGKKAPAAGL 150
            G    V   D+        +DG       +  +D   +P            ++      
Sbjct: 78  -GRYCLVDATDLVRGKVLAHRDGYGYLALEKGGDDWYLSP------------REMQTVFH 124

Query: 151 GDRILAKIFPSKDTVGPAYTARVVKLIDRRQNALLGVFKQTEGGGGRLMPIDRRGEEMVI 210
           GD++LA++  + D  G    A +V+++D   + ++G   +  G         R   +++I
Sbjct: 125 GDKVLARV-RNVDRRGRTEGA-IVEILDGSTSHIVGRLHEENGMKFVTSEDPRILHDLII 182

Query: 211 DPDGVGDAKDGDLIEVETSRNSGRYGLTRAKVLSVVGSVASEKAISMIAIYAHGIPHIFP 270
            PD   +A+ G ++  +  +   R    R  +  V+G   S      IAI  H IPH +P
Sbjct: 183 APDDCMNAEIGQVVVAQIVQRPKRNQHARGIITEVLGDYLSAGMEIEIAIRNHQIPHEWP 242

Query: 271 PNVLAEADAAKAATMSH----REDWRDLPLITIDPADAKDHDDAVYAELDPSPDNPDGVI 326
            +VL+E               R D R LPL+TID  DA+D DDAVY           G  
Sbjct: 243 DDVLSEVGELPVDVSEKDWQGRVDLRQLPLVTIDGEDARDFDDAVYCRRKAK----GGWT 298

Query: 327 VTVAIADVSWYVRPGAPLDREALKRGNSVYFPDRVVPMLPERISNDLCSLKEGVDRPALA 386
           + VAIADVS YVRPG+ LD+EAL+RGNSVYFP+ VVPMLPE +SN LCSLK  VDR  + 
Sbjct: 299 LWVAIADVSHYVRPGSALDQEALERGNSVYFPEFVVPMLPELLSNGLCSLKPKVDRLCMV 358

Query: 387 VRMTFSKEGRKASHTFHRIMMKSAAKLSYQQAQAAIDGNPD-DKTGTLLEPILKPLWHAY 445
             M+ +  G+  +  F+  +M S A+ +Y +    + G+    K    L   LK L   +
Sbjct: 359 AEMSLTATGQVTASKFYPAVMHSHARFTYDKVWGILSGDEALQKEYAPLVGDLKELHELF 418

Query: 446 EVMKRGRDRRQPLELDMPERKIQLRPDGTVDKVVIPERLDAHKLIEEMMIQANVAAAETL 505
           +   + ++ R  +E +  E +I    +  ++K+V   R DAHK+IEE MI ANVAAAE +
Sbjct: 419 KARLKLKEARGAIEFETTETQIIFDENKKIEKIVGRVRNDAHKIIEECMICANVAAAEFI 478

Query: 506 ETKKQRLVYRVHDAPTLSKQEVLREFLGTIGISMAKGVAMRANSFNGILARALDTPHQIM 565
           E  ++  VYRVH+ P+  + E  R FLG +GI +  G       +  +     + P Q +
Sbjct: 479 EKYEKPGVYRVHEGPSEERLEKFRAFLGELGIFLFGGSTPEPRHYRELHDAIAERPDQEL 538

Query: 566 VNEMVLRSQSQAIYSPENIGHFGLNLMKYAHFTSPIRRYADLIVHRALVGSLG-----LG 620
           +  M+LRS  QA+YSP+N GHFGL    Y HFTSPIRRY DL+VHR +   L       G
Sbjct: 539 IQTMMLRSMMQAVYSPDNQGHFGLAFDSYTHFTSPIRRYPDLLVHRIIKSILAREFDMAG 598

Query: 621 EGGITPQEEATLDDIAAEISTFERRAMAAERDTVNRLIAHHLSERVGEEFEGRVGGVTKA 680
             G    EE  L       S  ERRA  A RD V+ L   ++  RVGEE+ G +  VT  
Sbjct: 599 TDGGLGYEEKELVTFTEHSSMTERRADLATRDVVDWLKCEYMLTRVGEEYWGTISSVTSF 658

Query: 681 GLFVALPQFGADGFVPISTLGTDYFFYDEAHQALTGEKTGLGYQLGDTVQVRLA 734
           G+FVAL +   +G + IS LG DY+ +D     L GE     Y++GD V++++A
Sbjct: 659 GIFVALDELFVEGLIHISELGDDYYHFDALKMRLIGEHKRQSYRVGDRVKIKVA 712