Pairwise Alignments

Query, 405 a.a., DNA polymerase IV from Agrobacterium fabrum C58

Subject, 352 a.a., DNA polymerase IV from Pectobacterium carotovorum WPP14

 Score =  186 bits (472), Expect = 9e-52
 Identities = 116/301 (38%), Positives = 169/301 (56%), Gaps = 11/301 (3%)

Query: 23  IAHIDCDAFYASVEKRDNPELADKPVIVGGG--KRGVVSTACYIARIHGVRSAMPMFKAL 80
           I H+D D FYA++E RDNP L D P+ +GG   +RGV+STA Y AR +GVRSAM    AL
Sbjct: 4   IIHVDMDCFYAAIEMRDNPRLRDIPLAIGGSADRRGVISTANYPARRYGVRSAMATATAL 63

Query: 81  EACPDAVVIKPDMEKYSRVGREIRTMMQELTPLVQPLSIDEAFLDLSGTEKLHHDPPA-R 139
             CP   ++   ME Y    R+IR +    T L++PLS+DEA+LD+  T+  H +  A R
Sbjct: 64  RLCPHLTLLPGRMEVYKSTSRQIREIFSRYTSLIEPLSLDEAYLDV--TDSPHCNGSATR 121

Query: 140 VLAKFTGRVEKEVGVSVSAGLSYCKFLAKVASDLQKPRGFSVVGEAEALSFLAARPVTTI 199
           +  +    +  E+ ++ SAG++  KFLAK+AS+L KP G  V+   +   FL   P+  I
Sbjct: 122 IAEEIRRTIADELNLTASAGIAPIKFLAKIASELNKPNGQYVITPEQVDDFLLTLPLEKI 181

Query: 200 WGVGKAFAATLEADGIRMIAQLQEMEESELMRRYGVMGQRLFRLARGIDERHVHNNDPVK 259
            GVGK  A  LE  G+   A ++    ++L++ +G  G+ L+   +GIDER +  +   K
Sbjct: 182 PGVGKVTAKRLEERGLHTCADVRVYALADLLKEFGKFGRVLWERCQGIDERQISPDRLRK 241

Query: 260 SVSSETTFFHDISRHEDLVPILRSLSEKVAWRLKK----SGIAGQTVVLKMKTADFKSRT 315
           SV  E T   DI   E    ++  L E++  RLK+      IA Q V  K+K  DF+  T
Sbjct: 242 SVGVEKTLAQDIHDWEQCENLIEQLYEELEVRLKRVKPDLHIARQGV--KLKFDDFQQTT 299

Query: 316 R 316
           +
Sbjct: 300 Q 300