Pairwise Alignments

Query, 405 a.a., DNA polymerase IV from Agrobacterium fabrum C58

Subject, 353 a.a., DNA polymerase IV from Serratia liquefaciens MT49

 Score =  177 bits (450), Expect = 3e-49
 Identities = 119/340 (35%), Positives = 180/340 (52%), Gaps = 12/340 (3%)

Query: 23  IAHIDCDAFYASVEKRDNPELADKPVIVGGG--KRGVVSTACYIARIHGVRSAMPMFKAL 80
           I H+D D F+A+VE RD+P L D P+ +GG   +RGV+STA Y AR +GV SAM    AL
Sbjct: 4   IIHVDMDCFFAAVEMRDDPSLRDIPLAIGGSADRRGVISTANYPARRYGVHSAMSTAMAL 63

Query: 81  EACPDAVVIKPDMEKYSRVGREIRTMMQELTPLVQPLSIDEAFLDLSGTEKLHHDPPARV 140
           + CP   ++   M  Y      IR +    TPL++PLS+DEA+LD++   + +      +
Sbjct: 64  KLCPHLKLLPGRMAAYKEASLHIREIFARYTPLIEPLSLDEAYLDVTDCSQCNGSATL-I 122

Query: 141 LAKFTGRVEKEVGVSVSAGLSYCKFLAKVASDLQKPRGFSVVGEAEALSFLAARPVTTIW 200
             +    +  E+ ++ SAG++  KFLAK+AS+L KP G  V+  A+  +FL   P++ I 
Sbjct: 123 AEQIRQAIADELNLTASAGVAPIKFLAKIASELNKPNGQYVITPAQVPAFLQQLPLSKIP 182

Query: 201 GVGKAFAATLEADGIRMIAQLQEMEESELMRRYGVMGQRLFRLARGIDERHVHNNDPVKS 260
           GVGK  A  LE  G+   A +Q+ + + L++R+G  G+ L+   +GID R V      KS
Sbjct: 183 GVGKVTAKRLEEVGLITCADVQQYDLAALLKRFGKFGRVLWERCQGIDLREVSPERLRKS 242

Query: 261 VSSETTFFHDISRHEDL-VPILRSLSEKVAWRLKK----SGIAGQTVVLKMKTADFKSRT 315
           V  E T   DI   E+    I+  L  ++  RL+K      IA Q V  K+K  DF+  T
Sbjct: 243 VGVERTLAEDIHAWEECEALIVDKLYPELEMRLRKVKPDLHIARQGV--KLKFQDFQQTT 300

Query: 316 RNRRLDDPTQLADRIFRTGLALLEKETDGTKFRLIGIGVS 355
           +      P    D +         +  +G   RL+G+ V+
Sbjct: 301 QEHVW--PVLNKDDLINVARQAWSERREGRGVRLVGLHVT 338