Pairwise Alignments

Query, 405 a.a., DNA polymerase IV from Agrobacterium fabrum C58

Subject, 369 a.a., Nucleotidyltransferase/DNA polymerase involved in DNA repair from Kangiella aquimarina DSM 16071

 Score =  196 bits (498), Expect = 9e-55
 Identities = 126/340 (37%), Positives = 190/340 (55%), Gaps = 17/340 (5%)

Query: 23  IAHIDCDAFYASVEKRDNPELADKPVIVGGG--KRGVVSTACYIARIHGVRSAMPMFKAL 80
           I H+D D +YA++E RD P L ++PV VGG   KRGV++T  Y AR +GVRSAMP   A 
Sbjct: 14  IIHVDMDCYYAAIEMRDEPSLKNQPVAVGGSPDKRGVIATCNYEARSYGVRSAMPSAYAR 73

Query: 81  EACPDAVVIKPDMEKYSRVGREIRTMMQELTPLVQPLSIDEAFLDLSGTEKLHHDPPARV 140
             CP  V++ P+ +KY    + IR +  + T L++PLS+DEA+LD+  TE   +   A  
Sbjct: 74  RLCPGLVIVHPNFDKYRHDSKVIREIFAQYTDLIEPLSLDEAYLDV--TECTEYKGSATF 131

Query: 141 LAK-FTGRVEKEVGVSVSAGLSYCKFLAKVASDLQKPRGFSVVGEAEALSFLAARPVTTI 199
           +A+    ++ +++ ++ SAG++  KFLAK+ASD  KP G  V+   E   F+   PV  I
Sbjct: 132 IAQAIRYQIFEKLKLTASAGVAPNKFLAKIASDWNKPNGQFVITPEEVDDFVKQLPVAKI 191

Query: 200 WGVGKAFAATLEADGIRMIAQLQEMEESELMRRYGVMGQRLFRLARGIDERHVHNNDPVK 259
            GVGK     L   GI    +L+E++   L + +G  GQRL+ L+RGID+R V  + P K
Sbjct: 192 HGVGKKTTEKLHRMGIENCKELREIDLLTLSKTFGSFGQRLYELSRGIDQRPVITHYPRK 251

Query: 260 SVSSETTFFHDISRHEDLVPILRSLSEKVAWRLKKSGIAG--QTVVLKMKTADFKSRTRN 317
           S+S E T+  D+   ED +  L  L + +  R+ +SG+      +  K+K +DF + T  
Sbjct: 252 SLSVENTYDQDLITLEDCLDELPHLLQTLKRRVARSGVGAPINKLFAKLKFSDFTATTVE 311

Query: 318 RR---LDDPTQLADRIFRTGLALLEKETDGTKFRLIGIGV 354
           R    ++D   L   +   G    +K       RL+GIGV
Sbjct: 312 RTSFGIND--DLFYELMEEGFHRRQKTV-----RLLGIGV 344