Pairwise Alignments

Query, 405 a.a., DNA polymerase IV from Agrobacterium fabrum C58

Subject, 357 a.a., DNA polymerase IV from Agrobacterium fabrum C58

 Score =  214 bits (546), Expect = 2e-60
 Identities = 135/338 (39%), Positives = 187/338 (55%), Gaps = 5/338 (1%)

Query: 23  IAHIDCDAFYASVEKRDNPELADKPVIVGGGK-RGVVSTACYIARIHGVRSAMPMFKALE 81
           I H+D DAFYASVE+RDNPEL  +PV VG    RGVV+ A Y AR  GVRSAMP   A  
Sbjct: 4   IIHVDMDAFYASVEQRDNPELRGRPVAVGSAAARGVVAAASYEAREFGVRSAMPSVTAAR 63

Query: 82  ACPDAVVIKPDMEKYSRVGREIRTMMQELTPLVQPLSIDEAFLDLSGTEKLHH-DPPARV 140
            CPD + + P  + Y  V ++IR +  E T L++PLS+DEA+LD+  TE L   +    +
Sbjct: 64  RCPDLIFVPPRFDVYKAVSQQIRAIFAEYTRLIEPLSLDEAYLDV--TENLKGMEIATEI 121

Query: 141 LAKFTGRVEKEVGVSVSAGLSYCKFLAKVASDLQKPRGFSVVGEAEALSFLAARPVTTIW 200
            ++   R+++  G++ SAG+SY KFLAK+ASDL KP G +V+      +F+    V    
Sbjct: 122 ASEIRERIKQITGLNASAGISYNKFLAKMASDLNKPNGQAVITPKNGPAFVEQLAVKKFH 181

Query: 201 GVGKAFAATLEADGIRMIAQLQEMEESELMRRYGVMGQRLFRLARGIDERHVHNNDPVKS 260
           GVG A A  +   GI   A L+      L   +G  G   + +ARGIDER V  +   KS
Sbjct: 182 GVGPATAEKMHRFGIETGADLKSKSLQFLAEHFGKSGAYFYGIARGIDERQVRPDRIRKS 241

Query: 261 VSSETTFFHDISRHEDLVPILRSLSEKVAWRLKKSGIAGQTVVLKMKTADFKSRTRNRRL 320
           V +E TF  DI+  +     LR L+EKV    +   ++G+TV +K+K +DF   TR+R  
Sbjct: 242 VGAEDTFSVDINDLDLATAELRPLAEKVWHHCEAQRVSGKTVTVKVKYSDFTQATRSRTS 301

Query: 321 DDPTQLADRIFRTGLALLEKETDGTK-FRLIGIGVSDL 357
             P      I     ALL       +  RL+G+ +S L
Sbjct: 302 ALPVNGIQEILEAASALLATVYPFRRSVRLLGVTLSSL 339