Pairwise Alignments

Query, 348 a.a., NADH ubiquinone oxidoreductase I chain H from Agrobacterium fabrum C58

Subject, 335 a.a., NADH:ubiquinone oxidoreductase from Pseudomonas simiae WCS417

 Score =  251 bits (642), Expect = 1e-71
 Identities = 137/342 (40%), Positives = 203/342 (59%), Gaps = 19/342 (5%)

Query: 4   FFWSYVWPALIMVGQSLLLLVCLLVAIAFLLLADRKVWAAVQLRRGPNVVGPFGLFQSFA 63
           +F   V   +I V +++++L+ ++VA A L   +R++    Q R GPN VGPFG+FQ  A
Sbjct: 3   WFTPEVIDVIISVVKAIVILLAVVVAGALLSFVERRLLGWWQDRYGPNRVGPFGMFQIAA 62

Query: 64  DLLKFILKEPVIPAGANKAVFLLAPLVAVTLALATYAVIPFADGWVVANINVGILYIFAI 123
           D+LK   KE   P  A+K +F LAP+VA++  L  +A+IP    W VA++N+G+L+ FA+
Sbjct: 63  DMLKMFFKEDWTPPFADKVIFTLAPVVAMSALLIAFAIIPITPTWGVADLNIGLLFFFAM 122

Query: 124 SSLEVYGIIMGGWASNSKYPFLGALRSAAQMVSYEVSIGLVIVTVLLCVGSLNLTDIVLA 183
           + L VY ++  GW+SN+K+  LG+LR++AQ VSYEV +GL ++ +++ VGS N+ DIV  
Sbjct: 123 AGLSVYAVLFAGWSSNNKFALLGSLRASAQTVSYEVFMGLALMGIVVQVGSFNMRDIVEY 182

Query: 184 QRTGLGTMMGLPASFLDWHWLSLFPMFIVFFISGLAETNRPPFDLPEAESELVAGHMVEY 243
           Q   L            W  +  F  F  FFI+G+A T+R PFD PEAE EL  G+ +EY
Sbjct: 183 QAQNL------------WFIIPQFFGFCTFFIAGVAVTHRHPFDQPEAEQELADGYHIEY 230

Query: 244 GSTPYMMFMLGEYAAIVLICCLTTILFLGGWLPIVDVWFLNWVPGIV--WFALKGCMVFF 301
               + MF +GEY  I+LI  L   LF GGW     +     +P +   WF LK      
Sbjct: 231 AGMKWGMFFVGEYIGIILISALLVTLFFGGWHGPFGI-----LPQLAFFWFFLKTAFFIM 285

Query: 302 MIALTKAFVPRYRYDQLMRLGWKVFLPLSLAMVVIVAFVLKL 343
           +  L +A +PR RYDQ+M   W+  LPL+L  +++ A V+ L
Sbjct: 286 LFILLRASIPRPRYDQVMDFSWRFCLPLTLINLLVTAAVVLL 327