Pairwise Alignments

Query, 693 a.a., NADH ubiquinone oxidoreductase chain G from Agrobacterium fabrum C58

Subject, 960 a.a., putative Formate dehydrogenase, alpha subunit from Pseudomonas putida KT2440

 Score =  157 bits (396), Expect = 3e-42
 Identities = 116/423 (27%), Positives = 192/423 (45%), Gaps = 41/423 (9%)

Query: 4   LKVDGKEIEVPDHFTLLQACEEAGAEVPRFCFHERLSVAGNCRMCLIEVKGGPPKPAASC 63
           L +DG+ I VP   ++++A    G  +P+ C  + L   G+CRMC++E++G    P ASC
Sbjct: 28  LSIDGRAISVPAGTSVMRAAAMLGTSIPKLCATDSLEAFGSCRMCMVEIEGMRGYP-ASC 86

Query: 64  AMGVRDVRGGPNGELPEVFTNTPMVKKAREGVMEFLLINHPLDCPICDQGGECDLQDQA- 122
                     P  E   V T TP +   R  VME  + +HPLDC  C   G C+LQ  A 
Sbjct: 87  TT--------PVSEGMVVRTETPRLAGLRRNVMELYISDHPLDCLTCSANGNCELQTVAG 138

Query: 123 ------MAFGIAGSRYAENKRAVEDKYIGPLVKTVMNRCIHCTRCVRFTTEVAGIAELGL 176
                 + +G  G+ + + K+ V + Y         ++CI C+RCVR   ++ G   L +
Sbjct: 139 QVGLREVRYGYDGANHLDEKKDVSNPYF----DYEPSKCIVCSRCVRACEDIQGTFALTI 194

Query: 177 IGRGEDAEITTY-LEQAMTSELQ--GNVVDLCPVGALTSKPFAFTARPWELNKTETIDVM 233
            GRG ++ +     E  + SE    G  V  CP   LT K      +P       T    
Sbjct: 195 TGRGFESRVAAAGGENFLASECVSCGACVQTCPTATLTEKSLVQLGQP--ERSVITTCAY 252

Query: 234 DALGSAIRVDTRGREVMRVMPRVNEAINEEWISDKSRFIWD-GLKTQRLDRPYVRK--DG 290
             +G + R + +G +++R++P  N   N      K RF W       R+ +P +RK  + 
Sbjct: 253 CGVGCSFRAEIKGDQLVRMVPDKNGGANHGHACVKGRFAWGYATHPDRITKPMIRKRLED 312

Query: 291 RLQPATWGEAF----GAIKQAVAATSGSKIGAIAGDLSSVEEMFALKSLL-ASLGSANVD 345
             Q  +W EA        ++         IG I     + EE + ++ L+  + G+ NVD
Sbjct: 313 PWQEVSWDEAVTYAASEFRRIQLKYGRDSIGGITSSRCTNEEAYLVQKLVRTAFGNNNVD 372

Query: 346 -CRQ-----DGAALDPSLGRASYIFNSTIEGIEHADALLIVGSNPRFEAAVLNARIRKRW 399
            C +      G  L  +LG ++     + + +  AD +L++G+NP     V  +++++R 
Sbjct: 373 TCARVCHSPTGYGLKQTLGESA--GTQSFDSVMQADVVLVIGANPTDAHPVFGSQLKRRL 430

Query: 400 RRG 402
           R+G
Sbjct: 431 RQG 433



 Score = 35.8 bits (81), Expect = 1e-05
 Identities = 46/215 (21%), Positives = 73/215 (33%), Gaps = 42/215 (19%)

Query: 448 NPLIIIGQGALARADGAAVLAAAAKLAVSVGAVTEEWNGFSVLHTAAARVGGLDIGFVP- 506
           N  I  G G    + G+  +   A LA++ G +  E  G + L       G  D+G  P 
Sbjct: 536 NAAIYYGLGVTEHSQGSTAVMGIANLAMATGNIGREGVGVNPLRGQNNVQGSCDMGSFPH 595

Query: 507 ---------GEGAVAAAEMVT----------------------SMDVLFLLGAD------ 529
                     EG  A  E                         S   L+  G D      
Sbjct: 596 ELPGYRHVSNEGVRAEFEQAWGVTLQPDPGLRIPNMFEAALDGSFKALYCQGEDIAQSDP 655

Query: 530 ---EIDLSNKGAKFTVYIGSHGDQGAMNADVILPGAAYTEKSGIWVNTEGRVQVGNRAGF 586
               +  +    +  V      ++ A  A V LPG+++ EK G + N E R+    R   
Sbjct: 656 NTQHVTAALLAMECVVVQDIFLNETAKFAHVFLPGSSFLEKDGTFTNAERRIS-RVRKVM 714

Query: 587 APGEAREDWAILRALSDVLGKKLPFDSLSALRGQL 621
            P   + DW    AL++ LG  + +   S +  ++
Sbjct: 715 EPLAGKADWEATVALANALGYPMNYRHPSEIMDEI 749