Pairwise Alignments

Query, 434 a.a., NADH ubiquinone oxidoreductase chain F from Agrobacterium fabrum C58

Subject, 446 a.a., NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) from Variovorax sp. SCN45

 Score =  403 bits (1036), Expect = e-117
 Identities = 202/395 (51%), Positives = 273/395 (69%), Gaps = 6/395 (1%)

Query: 25  ARGHWDGTKQIIEKGR--DWIINEMKASGLRGRGGAGFPTGLKWSFMPKENDGRPHYLVV 82
           ARG +   ++I+ +G   D +I E+KASGLRGRGGAGFPTGLKWSFMP++  G+  YLV 
Sbjct: 44  ARGGYQALRKILTEGLTPDQVIAEVKASGLRGRGGAGFPTGLKWSFMPRQFPGQK-YLVC 102

Query: 83  NADESEPGTCKDREILRNDPHTLIEGCVIAGFAMGAHTAYIYVRGEYMREREALQAAIDE 142
           N+DE EPGTCKDR+IL+ +PH +IEG  IA +AMG    Y Y+ GE  +  +  + A++E
Sbjct: 103 NSDEGEPGTCKDRDILQFNPHIVIEGMAIAAYAMGISVGYNYIHGEIFQSYDRFEEALEE 162

Query: 143 CYDAGLLG-KNNKNGWDYDIYVHHGAGAYICGEETALLESLEGKKGQPRLKPPFPANMGL 201
              AG LG K   + +++ ++  HG GAYICGEETALLESLEGKKGQPR KPPFPA+ GL
Sbjct: 163 ARAAGYLGDKIMGSTYNFQLHAAHGFGAYICGEETALLESLEGKKGQPRFKPPFPASFGL 222

Query: 202 YGCPTTVNNVESIAVAPTILRRGASWFSSIGRPNNVGTKLFMVSGHVERPCTFEDALGLS 261
           YG PTT+NN E+ A  P I+R G   +   G+PNN GTK++ VSG VE P  +E  +G  
Sbjct: 223 YGKPTTINNTETFAAVPWIIRNGGPAYLECGKPNNGGTKIYSVSGDVELPGNYEVPMGTP 282

Query: 262 FRELIEHHCGGIRGGWDNLLGVIPGGASCPIVRGEDMKDAIMDFDGMREVKSSFGTGGMI 321
           F +L+E   GG+R G   L  VIPGG+S P++  + M    MD+D + +  S  G+G +I
Sbjct: 283 FSKLLEL-AGGVRKG-RTLKAVIPGGSSSPVLPADIMMACTMDYDSIAKAGSMLGSGAVI 340

Query: 322 VMDKSTDVIKAIARIAAFFKHESCGQCTPCREGTGWMWRVLERMVKGNAQKREIDMLFEV 381
           VMD S  +++++ R++ F+ HESCGQCTPCREGTGW++RV++R+  G  +  ++ +L  V
Sbjct: 341 VMDDSRSMVESLKRLSYFYMHESCGQCTPCREGTGWLYRVVDRIHNGQGKPSDMQLLDSV 400

Query: 382 TKQIEGHTICALGDAAAWPVQALIRNFRPEIEKRI 416
              I G TICALGDAAA PV+A+I++FR E E  I
Sbjct: 401 AGDIMGRTICALGDAAAMPVRAMIKHFRHEFEALI 435