Pairwise Alignments

Query, 434 a.a., NADH ubiquinone oxidoreductase chain F from Agrobacterium fabrum C58

Subject, 445 a.a., NADH-quinone oxidoreductase subunit F from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score =  322 bits (825), Expect = 1e-92
 Identities = 167/394 (42%), Positives = 237/394 (60%), Gaps = 4/394 (1%)

Query: 27  GHWDGTKQIIEKGRDWIINEMKASGLRGRGGAGFPTGLKWSFMPKENDGRPHYLVVNADE 86
           G+    K +     D I+N++K +GL+GRGGAGF TGLKWS MPK+      YL+ NADE
Sbjct: 34  GYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADE 93

Query: 87  SEPGTCKDREILRNDPHTLIEGCVIAGFAMGAHTAYIYVRGEYMREREALQAAIDECYDA 146
            EPGT KDR ++   PH L+EG +I+ FA+ A+  YI++RGEY+     L+ AI E  +A
Sbjct: 94  MEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEA 153

Query: 147 GLLGKNNKN-GWDYDIYVHHGAGAYICGEETALLESLEGKKGQPRLKPPFPANMGLYGCP 205
           GLLGKN    G+D++++VH GAG YICGEETAL+ SLEG++  PR KPPFPA  G++G P
Sbjct: 154 GLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGVWGKP 213

Query: 206 TTVNNVESIAVAPTILRRGASWFSSIGRPNNVGTKLFMVSGHVERPCTFEDALGLSFREL 265
           T VNNVE++   P IL  G  W+ +I +  + GTKL   SG V+ P  +E   G + RE+
Sbjct: 214 TCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREI 273

Query: 266 IEHHCGGIRGGWDNLLGVIPGGASCPIVRGEDMKDAIMDFDGMREVKSSFGTGGMIVMDK 325
           +E + GG+R G        PGGA    +  E   D  M+F+ + +  S  GT   + +D 
Sbjct: 274 LEDYAGGMRDGL-KFKAWQPGGAGTDFLT-EAHLDLPMEFESIGKAGSRLGTALAMAVDH 331

Query: 326 STDVIKAIARIAAFFKHESCGQCTPCREGTGWMWRVLERMVKGNAQKREIDMLFEVTKQI 385
             +++  +  +  FF  ESCG CTPCR+G  W  ++L  + +G  Q  +I+ L ++ + +
Sbjct: 332 EINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFL 391

Query: 386 -EGHTICALGDAAAWPVQALIRNFRPEIEKRIDQ 418
             G T CA    A  P+Q+ I+ FR E E  I Q
Sbjct: 392 GPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQ 425