Pairwise Alignments

Query, 434 a.a., NADH ubiquinone oxidoreductase chain F from Agrobacterium fabrum C58

Subject, 439 a.a., NADH-quinone oxidoreductase chain F from Caulobacter crescentus NA1000 Δfur

 Score =  652 bits (1681), Expect = 0.0
 Identities = 309/436 (70%), Positives = 356/436 (81%), Gaps = 2/436 (0%)

Query: 1   MLKDQDRIFTNLYGLKDKSLKGVMARGHWDGTKQIIEKGRDWIINEMKASGLRGRGGAGF 60
           +L+D+DRIFTNLYGL D  L+G   RG W+GTK I++ GRDWII  MK SGLRGRGGAGF
Sbjct: 4   ILEDKDRIFTNLYGLHDWGLEGAKKRGCWNGTKDILDAGRDWIIENMKNSGLRGRGGAGF 63

Query: 61  PTGLKWSFMPKE-NDGRPHYLVVNADESEPGTCKDREILRNDPHTLIEGCVIAGFAMGAH 119
            TGLKWSFMPKE  DGRPHYLVVNADESEPGTCKDREI+R+DPH LIEGC+IA  AM AH
Sbjct: 64  STGLKWSFMPKEVKDGRPHYLVVNADESEPGTCKDREIMRHDPHLLIEGCLIASRAMLAH 123

Query: 120 TAYIYVRGEYMREREALQAAIDECYDAGLLGKNNKNGWDYDIYVHHGAGAYICGEETALL 179
             YIY+RGEY+ ERE L+AAI + Y+A L+GKNN +GWD+DIYVHHGAGAYICGEETALL
Sbjct: 124 ACYIYIRGEYVFERERLEAAIKQAYEAKLVGKNNVHGWDFDIYVHHGAGAYICGEETALL 183

Query: 180 ESLEGKKGQPRLKPPFPANMGLYGCPTTVNNVESIAVAPTILRRGASWFSSIGRPNNVGT 239
           ESLEGKKGQPRLKPPFPA  GLYG PTTVNNVESIAVA TILRRGA+WF+  GRPNN GT
Sbjct: 184 ESLEGKKGQPRLKPPFPAGAGLYGMPTTVNNVESIAVAGTILRRGAAWFAGFGRPNNAGT 243

Query: 240 KLFMVSGHVERPCTFEDALGLSFRELIEHHCGGIRGGWDNLLGVIPGGASCPIVRGEDMK 299
           KLF VSGHV  PC  E+A+ + FR+L+E HCGGIRGGW NL  VIPGG+S P++  E  +
Sbjct: 244 KLFCVSGHVNLPCNVEEAMSIPFRQLVEDHCGGIRGGWGNLKAVIPGGSSVPMIPAEQCE 303

Query: 300 DAIMDFDGMREVKSSFGTGGMIVMDKSTDVIKAIARIAAFFKHESCGQCTPCREGTGWMW 359
           D  MDFD +R +KS  GT  +IVMDK TD+++AIAR++ F+KHESCGQCTPCREGTGWMW
Sbjct: 304 DLPMDFDALRNLKSGLGTAAVIVMDKDTDLVRAIARLSYFYKHESCGQCTPCREGTGWMW 363

Query: 360 RVLERMVKGNAQKREIDMLFEVTKQIEGHTICALGDAAAWPVQALIRNFRPEIEKRIDQY 419
           RV+ERMV G A  +EID L +VT Q+EGHTICALGDAAAWP+Q L R+FR E+E+RI  Y
Sbjct: 364 RVMERMVTGEADPKEIDTLLDVTTQVEGHTICALGDAAAWPIQGLFRHFRHEVEERIASY 423

Query: 420 -TYRAMDDGAVLEAAE 434
            + R    GA L AAE
Sbjct: 424 RSGRLHVQGAKLIAAE 439