Pairwise Alignments

Query, 396 a.a., NADH ubiquinone oxidoreductase chain D from Agrobacterium fabrum C58

Subject, 593 a.a., NADH-quinone oxidoreductase subunit C/D from Pseudomonas putida KT2440

 Score =  290 bits (743), Expect = 6e-83
 Identities = 150/389 (38%), Positives = 224/389 (57%), Gaps = 10/389 (2%)

Query: 11  INFGPEHPSAHGVLRLVLELDGEIVERVDPHIGLLHRGTEKLIETKTYLQAVPYFDRLDY 70
           +N GP HPSAHG  R+VL+LDGE +    P IG  HRG EK+ E +++   +PY DR+DY
Sbjct: 212 LNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMAERQSWHSFIPYTDRIDY 271

Query: 71  VAPMNQEHAFALAVEKLLGLEIPMRGQLIRVLYSEIGRILSHIMNVTTQAMDVGAMTPPV 130
           +  +     + LAVEKL G+++P +  +IR++ +E  RI SH++ + T   DVGAMTP  
Sbjct: 272 LGGVMNNLPYVLAVEKLAGIKVPQKVDVIRIMLAEFFRITSHLLFLGTYIQDVGAMTPVF 331

Query: 131 WGFEEREKLMVFYERACGARMHSAYVRPGGVHQDLP---PELVDDIGKWCDPFLTVLDNI 187
           + F +R++     E   G R+H A+ R GGV  DLP    +LV D  +W       LD  
Sbjct: 332 FTFTDRQRAYTVIEAITGFRLHPAWYRIGGVAHDLPRGWDKLVKDFVEWLP---KRLDEY 388

Query: 188 EGLLTDNRIYKQRNVDIGVVSLEDAFAWGFTGVMVRGSGAAWDLRRSQPYECYSDLEFDI 247
                 N I K R + +   + ++A  WG TG  +R +G  +DLR+++PY  Y + EF++
Sbjct: 389 TKAALQNSILKGRTIGVAAYNTKEALEWGTTGAGLRATGCNFDLRKARPYSGYENFEFEV 448

Query: 248 PVGKNGDCYDRYLIRMQEMRESVKIMKQCVDRLSGKHRIGPVSSLDGKVVPPKRGEMKRS 307
           P+  NGD YDR ++R++EMR+S++I+ QC+  +      GP  +      PP +    + 
Sbjct: 449 PLAHNGDAYDRCMVRVEEMRQSIRIIDQCLRNMPE----GPYKADHPLTTPPPKERTLQH 504

Query: 308 MEALIHHFKLYTEGYHVPAGEVYAAVEAPKGEFGVYVVADGSNKPYRCKIRAPGYAHLQA 367
           +E LI HF   + G  +PA E +  +EA KG    Y+ +DG    YR +IR P Y HLQ 
Sbjct: 505 IETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGGTMSYRTRIRTPSYPHLQQ 564

Query: 368 MDFLCKGHQLADVTAVLGSLDIVFGEVDR 396
           +  + KG  +AD+ A LGS+D V  +VDR
Sbjct: 565 IPSVIKGSMVADLIAYLGSIDFVMADVDR 593