Pairwise Alignments

Query, 479 a.a., DNA photolyase from Agrobacterium fabrum C58

Subject, 476 a.a., deoxyribodipyrimidine photo-lyase from Dickeya dianthicola ME23

 Score =  274 bits (700), Expect = 5e-78
 Identities = 188/487 (38%), Positives = 255/487 (52%), Gaps = 39/487 (8%)

Query: 9   IVWFRKDLRLSDNLALLAAVEH-GGPVIPVYI---REKSAGPLGGAQEWWLHHSLAALSS 64
           +VWFR DLRL+DNLAL AA +     V  V+I   ++ ++  +   Q  +L  +L  L  
Sbjct: 5   LVWFRHDLRLTDNLALHAACQDPDARVEAVFIATPQQWASHAMAPCQAAFLLDNLRCLQQ 64

Query: 65  SLEKAGGRLVLASGD----AERILRDLISETGADTVVWNRRYDPTGMATDKALKQKLRDD 120
           +L + G  L     D    + R L D   E  A  + +NR+Y+      D+ L+Q L   
Sbjct: 65  ALGEKGIPLHYRQCDDFAASVRWLADFCRERQATHLFYNRQYEWNERQRDRQLEQALAGV 124

Query: 121 GLTVRSFSGQLLHEPSRLQTKSGGPYRVYTPFWRALEGSDEPHAPADPPKSLTAPKVWPK 180
               R F   LL  P  + T SG  Y+V+TPF  A     +    A  P         P 
Sbjct: 125 S-ECRGFDDSLLLPPGSVVTGSGDMYKVFTPFRTAFLKCLQQRDVASVPT--------PA 175

Query: 181 SEKLSNWKLLPTKP-DWAK-DFSDIWTPGETGALDKLDDFIDGALKGYEEGRDFPAKPAT 238
           + +  +  L    P D+ + D    +  GE  AL +L  F    +  Y E R+ PA  AT
Sbjct: 176 ARRQGDITLASLAPFDYPQTDVHADFPAGEPAALQRLRQFCREQVMLYHEQRELPALAAT 235

Query: 239 SLLSPHLAAGEISPAAVWHATKGLSRH---IASNDISRFR--KEIVWREFCYHLLFHFPE 293
           S LSP+LA G +SP   ++  +    H   +A +D   F    E+VWREF  HLL   P 
Sbjct: 236 SKLSPYLALGILSPRQCFNRLR--MEHPDWLARSDSGAFTWFNELVWREFYRHLLVFSPT 293

Query: 294 LGEKN----WNDSFDAFSWRDDEKSFKAWTRGMTGYPIVDAGMRQLWQHGTMHNRVRMIV 349
           L +      W       +WR+      AW RG TGYPIVDA MRQL Q G MHNR+RMI 
Sbjct: 294 LCKHQPFIGWTRRV---AWRNAPDELAAWQRGETGYPIVDAAMRQLNQTGWMHNRLRMIC 350

Query: 350 ASFLIKHLLIDWRKGEKWFRDTLVDADPASNAANWQWVAGSGADASPFFRIFNPILQGEK 409
           ASFL+K LL DWR+GE++F   L+D D A+N   WQW A +G DA+P+FRIFNP  QGE+
Sbjct: 351 ASFLVKDLLHDWREGERYFMSQLLDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGER 410

Query: 410 FDGDGDYVRRFVPELEKLERKYIHKPFEAPKDALKKAGVELGKTYPLPIVDHGKARERAL 469
           FD DG+++RR+VPEL ++  K +H+P        ++        YPLPIVDH +AR R L
Sbjct: 411 FDPDGEFIRRWVPELAQIPGKAVHQPHHWAARQQRQI------DYPLPIVDHKQARTRTL 464

Query: 470 AAYAAVK 476
           AA+ A K
Sbjct: 465 AAFEAAK 471