Pairwise Alignments

Query, 497 a.a., ABC transporter, substrate binding protein from Agrobacterium fabrum C58

Subject, 527 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  151 bits (382), Expect = 5e-41
 Identities = 145/513 (28%), Positives = 220/513 (42%), Gaps = 57/513 (11%)

Query: 5   ALLTTCAIAGAFGANAANAGTVTYDDNYAVKAAWQMASDDSTLGMRVGCYEGLVRIGFDM 64
           AL     +A A     AN G     D +++  + Q       L +    YE LV    D+
Sbjct: 15  ALGAVSMVASAQTIRIANQGDALSLDPHSLNESLQ-------LSVTANVYETLVGRNKDL 67

Query: 65  RLEASLAESWKQTEPKVWEFKLRKGVKFQNGEDFNAAAAVNALTLLLKASVPARAFSPKQ 124
            L   LA SWKQT P VW F+LRKGV F +G  F A   V +           RA +   
Sbjct: 68  SLAPLLATSWKQTSPNVWRFELRKGVVFHDGTPFTADDVVFSFARAQGDGSDMRA-TLSD 126

Query: 125 IAGVEAVGDDVVKVTTIEPSVLLPAQLASPATAILAPSAYKDGK-INPI----------- 172
           I  V  VGD  V++ T  P  +LP  ++   T I++    ++ +   P+           
Sbjct: 127 IKAVRKVGDLAVEIETNGPFPILPDVIS--LTMIMSKKWCEENQATKPVDRRKGIENTAS 184

Query: 173 --GTCTGPFEITEVDPNQYMVMKANHGYWGGMPKLDGG--RVNFVPDAD--TRATQIRTG 226
                TGPF + E  PN   V   N  YWG   K+DG    V F P A+  TR   + +G
Sbjct: 185 FKANGTGPFRVRERQPNVRTVFTRNGTYWG---KIDGNAQEVIFTPIANPATRVAALVSG 241

Query: 227 EVQISRLVPPWSIKTIESTKGVKVAAISVPRITELLLN-------------NSRPPFKDK 273
           EV +   VP   I  I +    +V  I+ P +  + L                + PFKDK
Sbjct: 242 EVDVMEPVPVQDIARINAAPNARV--ITGPEMRTIFLGMDQKRDELQYSNVKGKNPFKDK 299

Query: 274 KVREAVRAAIDAAGIASSIYEEKVKSASMPFAPG-QPWAAEEPTS-TYDVAKAKSLLKEA 331
           +VR+A   AID AGI  ++     +  ++   PG   W AE+     YDV  AK LL EA
Sbjct: 300 RVRQAFYQAIDIAGIQRTVMRGASRPTALLVGPGINGWTAEQDKRLPYDVEAAKKLLTEA 359

Query: 332 GIAPGSLKVTILAYTMK-TELKDVAAIIQAQLEEIGIKVDVRVAEYSAIEPDLLAGNFDM 390
           G  P   +V++     +      +   + + L +IG+K+++         P +L  +   
Sbjct: 360 GY-PNGFEVSLNCPNDRYVNDGQICQSVASNLAKIGVKINLVAETKGTYFPKVLRRDTSF 418

Query: 391 VLLSRGYATDVIEPAGYLNADYSC-----TGTYNISHYCNEETDKLIKAAYAEVEPAKRY 445
            +L  G+     +    L++  SC     TG +N+  YCN + D+L K   +E +  KR 
Sbjct: 419 YML--GWTPTTYDSHNALSSLTSCPDDKGTGQFNLGAYCNPKLDELTKKIQSEGDKDKRN 476

Query: 446 AIYGQIAKKIYDDAVSVFLVHETVFDAYSEKLE 478
            +  +  K   DD   + L  +++    S+K+E
Sbjct: 477 EMIKEAFKIHADDVGHLPLHQQSLAWGVSKKVE 509