Pairwise Alignments

Query, 388 a.a., phage-related integrase from Agrobacterium fabrum C58

Subject, 319 a.a., Tyrosine recombinase XerD from Xanthobacter sp. DMC5

 Score = 53.5 bits (127), Expect = 8e-12
 Identities = 46/153 (30%), Positives = 71/153 (46%), Gaps = 19/153 (12%)

Query: 196 TGMRQSEVLSLHFEDIQNGRVTVWGVGATGQRTKSGKSRTVPLTARAQAVF----DRRRE 251
           +G+R SE++SL        R     +  TG   K  K R VPL+  A+A      D R+ 
Sbjct: 165 SGLRISELVSL---PAAAARARGDAILVTG---KGRKERLVPLSDPARAAMAAYLDARKA 218

Query: 252 --YTEGKAVFPS------LSKNSVAHYWGRLSEALNLESDKQFVPHILRHEFCSRLASNG 303
                 + +FPS      +++   A     L+ A  L+  K   PH+LRH F S L ++G
Sbjct: 219 AGLEASRWLFPSSGESGYVTRQQAARDLKELALAAGLDPAK-LSPHVLRHAFASHLLAHG 277

Query: 304 ENAAAIQKLAGHATLLVTQRYVHLFGDELDDVI 336
            +   +Q L GHA +  TQ Y H+  + L  ++
Sbjct: 278 ADLRVVQTLLGHADVSTTQIYTHVLDERLKSMV 310