Pairwise Alignments

Query, 388 a.a., phage-related integrase from Agrobacterium fabrum C58

Subject, 299 a.a., recombinase XerC from Pseudomonas simiae WCS417

 Score = 55.8 bits (133), Expect = 2e-12
 Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 16/157 (10%)

Query: 179 DRIGHQDMADYTVLSLDTGMRQSEVLSLHFE--DIQNGRVTVWGVGA------TGQRTKS 230
           D + H+D A    L   +G+R SE+  L+ +  D+ +G V V G G+       G++ + 
Sbjct: 127 DFLAHRDQA-ILELFYSSGLRLSELTGLNLDQLDLADGLVQVLGKGSKTRVLPVGRKARE 185

Query: 231 GKSRTVPLTARAQAVFDRRREYTEGKAVFPSLSKNSVAHYWGRLSEALNLESDKQFVPHI 290
                +PL        D      +G+ + P   +        R+  A   E  +   PH+
Sbjct: 186 ALQLWLPLRLLTNPADDAVFVSQQGRRLGPRAIQV-------RVKAAGERELGQNLHPHM 238

Query: 291 LRHEFCSRLASNGENAAAIQKLAGHATLLVTQRYVHL 327
           LRH F S +  + ++  A+Q+L GH+ +  TQ Y HL
Sbjct: 239 LRHSFASHMLESSQDLRAVQELLGHSDIKTTQIYTHL 275