Pairwise Alignments

Query, 388 a.a., phage-related integrase from Agrobacterium fabrum C58

Subject, 299 a.a., Tyrosine recombinase XerC from Pseudomonas putida KT2440

 Score = 55.8 bits (133), Expect = 2e-12
 Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 19/151 (12%)

Query: 188 DYTVLSL--DTGMRQSEVLSLHFE--DIQNGRVTVWGVGATGQRTKSGKSRTVPLTARAQ 243
           D  +L L   +G+R SE+ +L  +  D+  G V V G        K GK+R +P+  +A+
Sbjct: 133 DQAILELFYSSGLRLSELTNLDLDHLDLAAGLVQVLG--------KGGKARVLPVGRKAR 184

Query: 244 AVFD-----RRREYTEGKAVFPSLSKNSVAHYWGRL--SEALNLESDKQFVPHILRHEFC 296
                    R       +AVF +   N ++    RL    A   E  +   PH+LRH F 
Sbjct: 185 EALQAWYRLRGIGNPRDRAVFITRQGNRISPRAVRLRVKVAGERELGQHLHPHMLRHSFA 244

Query: 297 SRLASNGENAAAIQKLAGHATLLVTQRYVHL 327
           S +  + ++  A+Q++ GHA +  TQ Y HL
Sbjct: 245 SHVLESSQDLRAVQEMLGHADISTTQIYTHL 275