Pairwise Alignments

Query, 287 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 321 a.a., 23S rRNA (adenine(2030)-N(6))-methyltransferase (EC 2.1.1.266) from Variovorax sp. SCN45

 Score =  194 bits (493), Expect = 2e-54
 Identities = 116/312 (37%), Positives = 162/312 (51%), Gaps = 41/312 (13%)

Query: 2   NYRHIYHAGNFADVLKHAVLARLVRYLQNKDKAFRVLDTHAGIGLYDLSSEEAQKTGEWQ 61
           +YRH +HAGN ADVLKH VL   + +L  KD A  V+DTHAG GLY L  + A  +GE  
Sbjct: 3   SYRHAFHAGNHADVLKHTVLIATLDHLLEKDAALTVVDTHAGAGLYRLDGDYAGTSGEAA 62

Query: 62  TGIGKLMEA------------------------DLPAPIAELLEPYLAAVRELNPEGGMQ 97
            GI +L+                          +  AP+A+ +  YL  + + N +GG +
Sbjct: 63  EGILRLLSGKKEPAAPASAPAPAAKSAAKKAAPEAEAPLADAIARYLGVISDFNSKGGAR 122

Query: 98  FYPGSPKLARMLFRPQDRLSAMELHPDDARALS---RLFEGDYQVRVTELDGWLSLGAHL 154
            YPGSP + + L R  D+L   ELHP D+R LS      E   Q+ V   DG+ S    L
Sbjct: 123 VYPGSPFIIQHLLRDHDKLKLFELHPTDSRTLSANIAQLEAGRQIAVLLEDGFGSATKFL 182

Query: 155 PPKEKRGLILVDPPFELENEYQRLADGLNKAYRRFSTGTYCLWYPLKKGAPIRDFHERLQ 214
           PP  +R L+L+DP +E++ +Y R+ D   +A +RF+TGTY +WYP+       D   RL+
Sbjct: 183 PPPSRRALVLMDPSYEMKTDYGRVLDFAAEALKRFATGTYAIWYPIIPRPEAHDLPRRLK 242

Query: 215 SFDI---PKMLCAELSVKSDRL-----------EGLSGSGLIVVNPPYTLKDELHTLLPF 260
           +         L A L+VKS ++            GL  SG+ ++NPPYTLK  L   LP 
Sbjct: 243 TMATKAGKSWLHATLTVKSSKITKDAASGETQRPGLPASGMFLINPPYTLKPLLAEALPQ 302

Query: 261 LKTVMAQDRYAS 272
           L   + QDR A+
Sbjct: 303 LVERLGQDRNAT 314