Pairwise Alignments

Query, 287 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 285 a.a., Ribosomal RNA large subunit methyltransferase J from Acinetobacter radioresistens SK82

 Score =  199 bits (505), Expect = 8e-56
 Identities = 111/286 (38%), Positives = 165/286 (57%), Gaps = 6/286 (2%)

Query: 1   MNYRHIYHAGNFADVLKHAVLARLVRYLQNKDKAFRVLDTHAGIGLYDLSSEEAQKTGEW 60
           MNYRH +HAGNFADV+KH +L +L+  L +KDK +R +DTH G G YDLSS  AQK+GE+
Sbjct: 1   MNYRHHFHAGNFADVMKHVLLLQLLTRLNSKDKPYRYIDTHGGAGQYDLSSAPAQKSGEF 60

Query: 61  QTGIGKLMEAD--LPAPIAELLEPYLAAVRELNPEGGMQFYPGSPKLARMLFRPQDRLSA 118
            TGI +L++ D  +     E ++ YL  V  +  + G   YPGSP  A    R  D+ + 
Sbjct: 61  LTGIHRLVKLDDSVKRNAPEGVQQYLKLVESMRSQQGQGAYPGSPWFALQGMRDIDKATV 120

Query: 119 MELHPDDARALSRLFEGDYQVRVTELDGWLSLGAHLPPKEKRGLILVDPPFELE-NEYQR 177
            E+  D  + L      D +  + + D +  L A +PPKEKRGL+++DPP+ELE  ++ +
Sbjct: 121 FEMQRDVFQQLRDNIR-DSRAGLHKRDAYEGLLAVIPPKEKRGLVMIDPPYELERKDFPQ 179

Query: 178 LADGLNKAYRRFSTGTYCLWYPLKKGAPIRDFHERLQSFDIPKMLCAELSV-KSDRLEGL 236
           L + L  AY+++ TG + +WYP+K  A I  F +++    I + L  E+ V   D   GL
Sbjct: 180 LVELLQNAYKKWPTGIFAVWYPIKDRAMIERFEKKMMKTGIRRQLICEICVWPDDTPVGL 239

Query: 237 SGSGLIVVNPPYTLKDELHTLLPFLKTVMAQDRYASHRAF-WLRGE 281
           +G GL+V+NPP+   ++    L +L   +       H A  WL GE
Sbjct: 240 NGCGLLVINPPWKFSEDADEALQWLFPHLRMQEIGGHAAVRWLVGE 285