Pairwise Alignments

Query, 642 a.a., excinuclease ABC chain C from Agrobacterium fabrum C58

Subject, 607 a.a., UvrABC system protein C from Pseudomonas putida KT2440

 Score =  447 bits (1151), Expect = e-130
 Identities = 251/620 (40%), Positives = 366/620 (59%), Gaps = 28/620 (4%)

Query: 22  FVKHLPNSPGVYRMFNEAGDVLYVGKARSLKKRVGNYAQGRVHSNRIAQMVRFTTHMEFV 81
           F+      PGVYRMF+    +LYVGKA++LKKR+ +Y +    + + A +V     +E  
Sbjct: 10  FLATCSGRPGVYRMFDGEARLLYVGKAKNLKKRLASYFRKTGLAPKTAALVARIAQVETT 69

Query: 82  TTRTETEALLLEANLIKRLRPRFNVLLRDDKSFPYILITADNRAPAIFKHRGARARKGDY 141
            T  ETEALLLE NLIK  RP +N+LLRDDKS+PY+ ++ D   P +  HRGA+  KG Y
Sbjct: 70  ITANETEALLLEQNLIKEWRPPYNILLRDDKSYPYVFLS-DGEFPRLGIHRGAKKAKGRY 128

Query: 142 FGPFASAGAVGRTINSLQRAFLIRTCTDSVFETRTRPCLLYQIKRCSGPCTHEVSDEGYA 201
           FGP+ SAGA+  +++ LQ+AF +R C DS +  RTRPCL YQIKRC GPCT  V+ E YA
Sbjct: 129 FGPYPSAGAIRESLSLLQKAFSVRQCEDSYYANRTRPCLQYQIKRCKGPCTDLVTAEEYA 188

Query: 202 ELVKEAKDFLSGKSQAVKTAIARQMNEASEDLDFERAAIYRDRLAALSHVQSHQGINPAG 261
           E V+ +  FL G+SQ +   +  +M +A+  LDFE+AA  RD++A L  VQ  Q I   G
Sbjct: 189 EDVRHSVMFLEGRSQQLGNELNAEMEKAAMALDFEKAAELRDQIALLRRVQDQQYIE-GG 247

Query: 262 IEEADVFAIHHEGGISCIQVFFFRTGQNWGNRAYFPKADPSLPGSEILNAFLAQFY---D 318
             + DV A     G +C+ +   R G+  G++ +FP+       +E++ AFL+Q+Y    
Sbjct: 248 SGDVDVIAAFVNPGGACVHLISVRGGRVLGSKNFFPQVGIEEEVAEVMAAFLSQYYLGNA 307

Query: 319 DKPVPKQILLSETVEEQELLAAALGEKAGHKVTISVPQRGEKKDITDHVLANAREAHGRK 378
           ++ +P +++++   E+   +  AL    G ++TIS   RG +       + NA +A   +
Sbjct: 308 ERELPGELIVNVVHEDFNAITEALHTLRGRELTISHRVRGTRARWQQLAVTNAEQALNAR 367

Query: 379 LAETSSQARLLKGFAETFNLPYVPRRIEIYDNSHIMGTNAVGGMVVAGPEGFVKNQYRKF 438
           LA     A   +  AE   L  VP+R+E YD SH  G   V   VV GPEG +K+ YR+F
Sbjct: 368 LANRQHMAARFEALAEVLGLDEVPQRLECYDISHSSGEATVASCVVFGPEGPIKSDYRRF 427

Query: 439 NIKSTDITPGDDFGMMREVMTRRFSRLLKEEGKPDRAQTPTPEEAADLPFPAWPDVILID 498
           NI+  D+T GDD+  M + +TRR+ R+   EGK                    PDV+L+D
Sbjct: 428 NIE--DVTAGDDYAAMHQALTRRYGRIKDGEGK-------------------LPDVLLVD 466

Query: 499 GGQGQMTAVRAILDELGIRDCVTAIGVAKGVDREAGRERFFA-DGRSDFSLPPRDPVLYF 557
           GG+GQ+   R ++ ELG  D +T +GVAKGV R+AG E  +  D   +F+L      L+ 
Sbjct: 467 GGKGQLNMARDVMQELGFTD-LTLLGVAKGVTRKAGFETLYLNDVHHEFTLKGDSSALHL 525

Query: 558 IQRMRDEAHRFAIGSHRARRKKEMVRNPLDEISGIGPGRKRSLLQHFGTAKAVSRAGLND 617
           IQ++RDEAHRFAI  HRARR K    + L++++G+GP R+R LL+HFG  + ++RA +++
Sbjct: 526 IQQIRDEAHRFAITGHRARRGKARRVSSLEDVAGVGPKRRRDLLKHFGGLQELNRASIDE 585

Query: 618 LMTVTGISETVARQIYNHFH 637
           +    GIS+ +A  IY   H
Sbjct: 586 IAKAPGISKKLAESIYASLH 605