Pairwise Alignments

Query, 642 a.a., excinuclease ABC chain C from Agrobacterium fabrum C58

Subject, 606 a.a., excinuclease ABC subunit C from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  261 bits (668), Expect = 5e-74
 Identities = 187/633 (29%), Positives = 300/633 (47%), Gaps = 54/633 (8%)

Query: 21  EFVKHLPNSPGVYRMFNEAGDVLYVGKARSLKKRVGNY-AQGRVHSNRIAQMVRFTTHME 79
           E + HLP+ PG+Y+ F++ G ++YVGKA  ++KRV +Y  +   H+ +  ++V     +E
Sbjct: 9   EKISHLPHKPGIYKFFDDNG-IIYVGKAVDIRKRVSSYFNRSAQHNKKTLKLVSQIKDIE 67

Query: 80  FVTTRTETEALLLEANLIKRLRPRFNVLLRDDKSFPYILITADNRAPAIFKHRGARARKG 139
           F    TE +A LLE NLIK+ +P++N+LL+D K++PYI I  + R P +   R  +    
Sbjct: 68  FTIVDTEADAFLLENNLIKQYQPKYNILLKDGKTYPYICI-VNERFPRVITTRNKQNDGS 126

Query: 140 DYFGPFASAGAVGRTINSLQRAFLIRTCT-----DSVFETRTRPCLLYQIKRCSGPCTHE 194
            YFGP+ S  ++   +  ++  + +RTCT     +++   + + CL Y I  C GPC   
Sbjct: 127 RYFGPYPSVTSMNVVLELIRTLYPLRTCTYNLSPENIAAGKFKVCLEYHIGNCKGPCEAL 186

Query: 195 VSDEGYAELVKEAKDFLSGKSQAVKTAIARQMNEASEDLDFERAAIYRDRLAALSHVQSH 254
           V +  Y + + + K+ LSG     K      M  A+ +  +E A  Y+ +L  L   Q  
Sbjct: 187 VEETEYNQHIAQIKNILSGNLSVAKNYFKEHMAAAAAEFQYELAHKYKQKLDMLEDFQVR 246

Query: 255 QGINPAGIEEADVFAIHHEGGISCIQVFFFRTGQNWGNRAYFPKADPSLPGSEILNAFLA 314
             +    +   DVF I      + I       G     ++   +       ++IL + + 
Sbjct: 247 STVVSNTLTNIDVFTITSNEQCAFINYLKVMNGSIILTQSLEIEKKLDEEDADILASVIV 306

Query: 315 QFYDDKPVPKQILLSETVEEQELLAAALGEKAGHKVTISVPQRGEKKDITDHVLANA--- 371
           Q   +          E+   + +    LG    + +T++ PQ G+KK +    L NA   
Sbjct: 307 QLRQE---------FESTAREVITNIELGLPLDN-ITLTHPQIGDKKKLLSLSLKNALYL 356

Query: 372 ---REAHGRKLAETSSQ--ARLLKGFAETFNLPYVPRRIEIYDNSHIMGTNAVGGMVVAG 426
              RE    K  E + Q   R+L+   +   L  +PR+IE +DNS+  G N V  MV   
Sbjct: 357 RKEREGRQEKNKELNEQRELRVLETLKKDLRLTELPRQIECFDNSNFQGDNPVASMVCFK 416

Query: 427 PEGFVKNQYRKFNIKSTDITPGDDFGMMREVMTRRFSRLLKEEGKPDRAQTPTPEEAADL 486
                K  YR FNIK+  +   +DF  M E++TRR+ RLL EE KP              
Sbjct: 417 NGKPSKKDYRHFNIKT--VVGANDFESMYEIVTRRYRRLLDEE-KP-------------- 459

Query: 487 PFPAWPDVILIDGGQGQMTAVRAILDELGIRDCVTAIGVAKGVDREAGRERFFADGRSDF 546
                P +I+IDGG+GQ+      L +L I   V  +G+AK ++     E F+       
Sbjct: 460 ----LPQLIVIDGGKGQLGMAVKALRDLNIYGQVAVVGIAKRLE-----EIFYPGDTLPL 510

Query: 547 SLPPRDPVLYFIQRMRDEAHRFAIGSHRARRKKEMVRNPLDEISGIGPGRKRSLLQHFGT 606
            +  +   L  IQR+R+EAHRFAI  HR++R    ++  L +I GIGP    +LLQ + +
Sbjct: 511 YIDKKSESLKLIQRLRNEAHRFAITFHRSKRDAGTLKTELTDIKGIGPSTADALLQKYRS 570

Query: 607 AKAVSRAGLNDLMTVTGISETVARQIYNHFHES 639
            K +      +L     I +  A  +Y + H S
Sbjct: 571 VKKLRELSQEEL--AEEIGKAKAAVLYAYLHHS 601