Pairwise Alignments

Query, 645 a.a., GGDEF family protein from Agrobacterium fabrum C58

Subject, 897 a.a., Sensory box/GGDEF family protein from Pseudomonas fluorescens GW456-L13

 Score =  138 bits (347), Expect = 1e-36
 Identities = 118/439 (26%), Positives = 195/439 (44%), Gaps = 21/439 (4%)

Query: 212 AVKKREVAARTDSLTGLPNRRALKDHIEMTTRQAPAVPHALLLIEIVNIADVAAYQGDDW 271
           A ++ E  A TD+LT L NR A   +++    +    P +LLL++I N   +    G   
Sbjct: 461 AQQRIERLAYTDNLTNLGNRPAFIRNLDERFARDSDAPISLLLVDIDNFKRINDSLGHQT 520

Query: 272 ADLFWPKLAREICDGENGLLSKFNDPRSFMFGDATLAVVIEGVSLEKSESAGLVLHLHEG 331
            D     LAR +    N L+   +  R   F     AV+++   L   +     L     
Sbjct: 521 GDKLLISLARRL---RNSLIPSGSLAR---FASNEFAVLLDNSDLTTGQQVANQLLATLD 574

Query: 332 LIAFFRSAEAGPVPHLKIGAANLEMVSHQNVASFLRHLSLALRRSE----NPVQIFPFSF 387
              F  +        + +  A L     Q +   +R+  LAL +++    + VQ+F  + 
Sbjct: 575 KPMFVDNQLISVTGSVGLACAPLHGRDPQTL---MRNAGLALHKAKANGKHQVQVFTEAL 631

Query: 388 AEKAARDEGVRQMLVRWIKNGKPPIFYQPKFEIHNRRMIGAEALLRAIDTHGQALSPYYV 447
             +A+    V   L R +   +  +FYQPK  + + R++G EALLR        + P   
Sbjct: 632 NAEASYKLFVENNLRRALTQNELDVFYQPKLCLRSGRLLGMEALLRWDHPEKGMIRPDQF 691

Query: 448 LEIAERHRLLVEF-EWSTIEAVVRDLAELPGLDPDFHLAVNISASSFATACFADRVVALL 506
           + +AE   L++   +W   +A     A       +  +A+N+S   F+       +  +L
Sbjct: 692 ISVAEETGLIIPIGKWIARQACRMSKALTAADLGNLQVAINLSPKQFSDPDLVASIANIL 751

Query: 507 QEMTVPAHRLSIEVTEMSRMPTTDSVQQNFDTLIAAGVRLALDDFGTGYAALTLLARFPF 566
           +E  +PAH L +E+TE   +  T+      D L   G+ LA+DDFGTGY++L+ L +FP 
Sbjct: 752 KEEALPAHLLELELTEGLLLEATEDTHLQLDQLKRLGLTLAMDDFGTGYSSLSYLKKFPI 811

Query: 567 EEVKIDQWMTSRL----DQARFRDAVVLAFESAERYGAKLVTEGIETEEQCRILMQMGIR 622
           + +KID+     +    D      AV+     A     K+V EGIET EQ   L +    
Sbjct: 812 DIIKIDRSFIHEIPDNQDDMEITSAVI---AMAHNLKLKVVAEGIETAEQLSFLRRHRCD 868

Query: 623 FGQGYLYSPAVPLDRLLPR 641
            GQGYL+   +P + L+ +
Sbjct: 869 VGQGYLFDRPIPGNELIDK 887