Pairwise Alignments

Query, 645 a.a., GGDEF family protein from Agrobacterium fabrum C58

Subject, 695 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  145 bits (367), Expect = 5e-39
 Identities = 174/629 (27%), Positives = 275/629 (43%), Gaps = 57/629 (9%)

Query: 51  YGVVFGATGFLLTLLVSEF----IQLPSKPYIR---SDLLFLAGVVGSWQGGLISLALIS 103
           Y +   A   L+ +L S F    +  PS P ++     L+  AG+      G+ +L ++ 
Sbjct: 74  YDLALTAFSLLIAVLSSGFALWLVSQPSLPALQLGFGALIMGAGIACMHYTGMAALRMLP 133

Query: 104 AGRFLFGGPALFGAAFLDMSVISAFGIAIYGWMRRRRLTELGMREIAGVFAIRIFAALFA 163
              +    P LFGA+ L    + A   A++   R RR T   +R+I G+ A+ +  A+  
Sbjct: 134 GIDY---DPTLFGASLL--IAVGASAAALWIAFRLRRHTPY-VRQIRGLAAVVMGVAIVG 187

Query: 164 ICLTYGLGMVGQDV----FLSNVGRRIVG---------ATVGLPMIACLFLLL--RSEAR 208
           +  T   GM   +     F   +G  + G          T+ +  +A L  +L  R EAR
Sbjct: 188 MHYT---GMAAANFPEGSFCGALGGGLQGDSLVYLVLITTLAVLAVALLTSVLDARLEAR 244

Query: 209 AREAVKKREVA-------ARTDSLTGLPNRRALKDHIEMTTRQAPAVP--HALLLIEIVN 259
             E  +   +A       A  D+LT LPNR  L D IE    +        AL+ I++  
Sbjct: 245 TAELARSLTLANQELTQLALHDTLTDLPNRTLLADRIEQAIAKVAEQGGCFALMFIDLDG 304

Query: 260 IADVAAYQGDDWADLFWPKLAREICDGENGLLSKFNDPRSFMFGDATLAVVIEGVSLEKS 319
              V    G    DL    +A  +     G L    D  + + GD  + +V     L++ 
Sbjct: 305 FKPVNDAFGHHIGDLLLKAVAARL----RGHLHS-QDTLARIGGDEFVLLV----ELQEP 355

Query: 320 ESAGLVLHLHEGLIAF-FRSAEAGPVPHLKIGAANLEMVSHQNVASFLRHLSLALRRSE- 377
             A  V      L++  FR AE        +G   L   + Q+    LR+   A+  ++ 
Sbjct: 356 NDAMDVAVKQVNLVSRPFRVAEHDLQLSASLGIV-LYPGNGQDQHELLRNADAAMYHAKS 414

Query: 378 ---NPVQIFPFSFAEKAARDEGVRQMLVRWIKNGKPPIFYQPKFEIHNRRMIGAEALLRA 434
              N    F  S    A +   + Q L   ++  +  + YQPKF+    + IGAEALLR 
Sbjct: 415 AGKNGYSFFDVSMNSNARQQLQLLQDLRLALEQRQFRLHYQPKFDAQACQPIGAEALLRW 474

Query: 435 IDTHGQALSPYYVLEIAERHRLLVEF-EWSTIEAVVRDLAELPGLDPDFHLAVNISASSF 493
                  L P   + +AE+  L++   EW   EA  +    L      + +AVN+SA  F
Sbjct: 475 EHPQQGLLLPDRFIGLAEKTGLIIPIGEWVLTEACRQMRQWLDQGHHGWRMAVNLSAIQF 534

Query: 494 ATACFADRVVALLQEMTVPAHRLSIEVTEMSRMPTTDSVQQNFDTLIAAGVRLALDDFGT 553
             A   D V   LQ+  +PA+ L++E+TE + M   D+       L   GV L++DDFGT
Sbjct: 535 CHAGLVDSVARALQQNGLPANCLTLEITETTAMHDADASLTVLQRLSDMGVDLSIDDFGT 594

Query: 554 GYAALTLLARFPFEEVKIDQWMTSRLDQARFRDAVVLAFES-AERYGAKLVTEGIETEEQ 612
           GY++L  L R P  E+KID+     L+Q     A+V A  +  +  G ++V EG+ET++Q
Sbjct: 595 GYSSLMYLKRLPANELKIDRGFVRDLEQDSDDAAIVSAIVALGQALGLRIVAEGVETDKQ 654

Query: 613 CRILMQMGIRFGQGYLYSPAVPLDRLLPR 641
              L ++G    QGYL    VP ++ + +
Sbjct: 655 QDFLTRLGCDSLQGYLLGQPVPAEQFMSK 683