Pairwise Alignments

Query, 645 a.a., GGDEF family protein from Agrobacterium fabrum C58

Subject, 896 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  140 bits (353), Expect = 2e-37
 Identities = 120/441 (27%), Positives = 196/441 (44%), Gaps = 25/441 (5%)

Query: 212 AVKKREVAARTDSLTGLPNRRALKDHIEMTTRQAPAVPHALLLIEIVNIADVAAYQGDDW 271
           A ++ E  A TD+LT L NR A    ++    +       LLL++I N   +    G   
Sbjct: 460 AQQRIERLAYTDNLTNLGNRPAFIRSLDERFARDGESSMCLLLVDIDNFKRINDSLGHQT 519

Query: 272 ADLFWPKLAREICDG--ENGLLSKFNDPRSFMFGDATLAVVIEGVSLEKSESAGLVLHLH 329
            D     LAR + +     G+L++F             AV+++  SLE  +     L   
Sbjct: 520 GDKLLISLARRLRNSLHSGGILARF--------ASNEFAVLLDDTSLEDGQGVAQQLLCT 571

Query: 330 EGLIAFFRSAEAGPVPHLKIGAANLEMVSHQNVASFLRHLSLALRRSE----NPVQIFPF 385
                F  +        + +  A L  V   + AS +++  LAL +++    + VQ+F  
Sbjct: 572 LDKPMFVDNQLINVTASVGLACAPLHGV---DPASLMKNAGLALHKAKANGKHQVQVFTE 628

Query: 386 SFAEKAARDEGVRQMLVRWIKNGKPPIFYQPKFEIHNRRMIGAEALLRAIDTHGQALSPY 445
               +A+    V   L R +   +  +FYQPK  + + R++G EALLR        + P 
Sbjct: 629 VLNAEASYKLFVENNLRRALTQNELDVFYQPKLCLRSGRLLGLEALLRWNHPERGMIRPD 688

Query: 446 YVLEIAERHRLLVEF-EWSTIEAVVRDLAELPGLDPDFHLAVNISASSFATACFADRVVA 504
             + +AE   L++   +W   +A             + H+A+N+S   F+       +  
Sbjct: 689 QFISVAEETGLIIPIGKWVVRQACCMSQQLRKAGLGNLHVAINLSPKQFSDPDLVASIST 748

Query: 505 LLQEMTVPAHRLSIEVTEMSRMPTTDSVQQNFDTLIAAGVRLALDDFGTGYAALTLLARF 564
           +L+E  +P H L +E+TE   +  ++   +  D L A G+ LA+DDFGTGY++L+ L +F
Sbjct: 749 ILKEEALPPHLLELELTEGLLLEASEDTHRQLDELKALGLTLAMDDFGTGYSSLSYLKKF 808

Query: 565 PFEEVKIDQWMTSRL----DQARFRDAVVLAFESAERYGAKLVTEGIETEEQCRILMQMG 620
           P + +KID+   + +    D      AVV     A     K+V EGIET EQ   L +  
Sbjct: 809 PIDILKIDRSFINEIPDNQDDMEITSAVV---AMAHNLKLKVVAEGIETPEQLAFLRRHR 865

Query: 621 IRFGQGYLYSPAVPLDRLLPR 641
              GQGYL+   +P   L  R
Sbjct: 866 CDVGQGYLFDRPIPGRELAER 886