Pairwise Alignments

Query, 645 a.a., GGDEF family protein from Agrobacterium fabrum C58

Subject, 698 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Pseudomonas fluorescens SBW25

 Score =  131 bits (329), Expect = 1e-34
 Identities = 167/616 (27%), Positives = 258/616 (41%), Gaps = 62/616 (10%)

Query: 57  ATGFLLTLLVSEFIQLPSKPYIRSDLLFLAGVVGSWQGGLISLALISAGRFLFGGPALFG 116
           ++GF L L+     +LP+       L+   G+      G+ ++ +     +    PALFG
Sbjct: 89  SSGFALWLVSQP--RLPAWQLALGALIMGTGIASMHYTGMAAMRMTPGIDY---DPALFG 143

Query: 117 AAFLDMSVISAFGIAIYGWMRRR----RLTELGMREIAGVFAI------RIFAALFAICL 166
           A+ L     S   + I   +RR     RL   G   + G FAI       + AA FA   
Sbjct: 144 ASLLIAVAASGAALWIAYNLRRNTPYVRLARGGAAVVMG-FAIVGMHYTGMAAARFADES 202

Query: 167 TYGLGMVGQDVFLSNVG--RRIVGATVGLPMIACLFLLLRSEARAREAVKKREVA----- 219
             G  + G    LS  G    ++  T+ +  IA L  LL +   AR AV    +      
Sbjct: 203 FCGAALNG----LSGKGLDNLVLVTTLAVLAIALLTSLLDARLEARTAVLADSLTQANQE 258

Query: 220 ----ARTDSLTGLPNRRALKDHIE--MTTRQAPAVPHALLLIEIVNIADVAAYQGDDWAD 273
               A  D LTGLPNR  L D I+  M   +      AL+ I++     V    G    D
Sbjct: 259 LTHLALHDMLTGLPNRTLLADRIQQAMQAVKEQGGCFALMFIDLDGFKPVNDAFGHHMGD 318

Query: 274 LFWPKLAREICDGENGLLSKFNDPRSFMFGDATLAVVIEGVSLEKSESAGLVLHLHEGLI 333
               ++   + +       +  D  + + GD  + +V     L + + A   L L E  +
Sbjct: 319 QLLSEVGVRLRED-----LRSQDTLARIGGDEFVLLV----QLTQPDDA---LGLAERQV 366

Query: 334 AFFRSAEAGPVPHLKIGAA----------NLEMVSHQNVASFLRHLSLALRRSENPVQIF 383
                A       LKI A+          N       N  + + H   A    +N    F
Sbjct: 367 VLINRAFRVAEHELKISASVGIAMFPGNGNSPQELLMNADAAMYH---AKGMGKNGYSFF 423

Query: 384 PFSFAEKAARDEGVRQMLVRWIKNGKPPIFYQPKFEIHNRRMIGAEALLRAIDTHGQALS 443
             S    A +   + Q L   ++  +  ++YQPKF+  +   +GAEALLR        L 
Sbjct: 424 DASMNTNARKQLQLLQDLRNAVEQQQFRLYYQPKFDALSGIPVGAEALLRWEHPQQGLLL 483

Query: 444 PYYVLEIAERHRLLVEF-EWSTIEAVVR-DLAELPGLDPDFHLAVNISASSFATACFADR 501
           P   +++AE+  L++   EW   EA  +  L    G +  + +AVN+SA  F        
Sbjct: 484 PAMFIDMAEKTGLIIPIGEWVLNEACRQMSLWYAEGYE-HWRIAVNLSALQFCHVGLVKS 542

Query: 502 VVALLQEMTVPAHRLSIEVTEMSRMPTTDSVQQNFDTLIAAGVRLALDDFGTGYAALTLL 561
           V A L+   +PA+ L++E+TE + M   D+       L   GV L++DDFGTGY++L  L
Sbjct: 543 VAAALERHQLPANSLTLEITETTAMSDADASMTVLQQLSDMGVDLSIDDFGTGYSSLMYL 602

Query: 562 ARFPFEEVKIDQWMTSRLDQARFRDAVVLAFES-AERYGAKLVTEGIETEEQCRILMQMG 620
            R P  E+KID+     L+      A+V A  +  +  G ++V EG+ET+ Q   L ++G
Sbjct: 603 KRLPANELKIDRGFVRDLEHDSDDAAIVSAIVALGQALGLRIVAEGVETDVQQSFLTRLG 662

Query: 621 IRFGQGYLYSPAVPLD 636
               QGYL    +P D
Sbjct: 663 CNSLQGYLLGHPLPAD 678