Pairwise Alignments

Query, 645 a.a., GGDEF family protein from Agrobacterium fabrum C58

Subject, 772 a.a., diguanylate cyclase from Agrobacterium fabrum C58

 Score =  126 bits (316), Expect = 4e-33
 Identities = 124/444 (27%), Positives = 196/444 (44%), Gaps = 24/444 (5%)

Query: 210 REAVKKREVAARTDSLTGLPNRRALKDHIEMTTRQ--APAVPHALLLIEIVNIADVAAYQ 267
           R+  ++ E  A  D+LTGLPNR  L   +E       A   P  ++L+++     V    
Sbjct: 315 RDMAQQLEHMAHHDALTGLPNRVLLMKTLETRLEHLSASGQPFNVMLLDLDRFKAVNDTL 374

Query: 268 GDDWADLFWPKLAREICD--GENGLLSKFNDPRSFMFGDATLAVVIEGVSLEKSESAGLV 325
           G    D     +A  I    GEN ++S+         GD    +       E S++A L 
Sbjct: 375 GHAAGDALLVAVASRISAVLGENDMVSRLG-------GDEFAIIQSTNADCE-SDAAMLA 426

Query: 326 LHLHEGLIAFFRSAEAGPVPHLKIGAANLEMVSHQNVASFLRHLSLALRRSENP---VQI 382
             +   +   F    +       IG A    V   +    L+H  L L R+++      +
Sbjct: 427 ARVVHAVSRSFSLEGSTISIDTSIGIA-CAPVHGTSATQLLQHADLGLYRAKSMGCGYFV 485

Query: 383 FPFSFAEKAARDEGVRQMLVRW-IKNGKPPIFYQPKFEIHNRRMIGAEALLRAIDTHGQA 441
           F     + AA+ +   ++ ++  ++N +  ++YQP   + + R++  EAL R   +    
Sbjct: 486 FYEPGMDMAAKHKHALEIDMKSALENQEFELYYQPVVNLQSGRIVAYEALARWRHSKLGL 545

Query: 442 LSPYYVLEIAERHRLLVEF-EWSTIEAVVRDLAELPGLDPDFHLAVNISASSFATACFAD 500
           ++P   + +AE +  +    EW   +A + D    P    D  LAVN+SA   +      
Sbjct: 546 ITPDRFITLAEENNFIKPLGEWVLAQACM-DAMTWP---KDIRLAVNLSAVQLSNDDIVP 601

Query: 501 RVVALLQEMTVPAHRLSIEVTEMSRMPTTDSVQQNFDTLIAAGVRLALDDFGTGYAALTL 560
            V   L++   PA RL +EVTE + M   DS  +    L   GVRLALDDFGTGYA L+ 
Sbjct: 602 VVDRALEKSGFPAERLELEVTETA-MLERDSSTKALKLLKERGVRLALDDFGTGYAGLST 660

Query: 561 LARFPFEEVKIDQWMTSRLDQARFRDAVV-LAFESAERYGAKLVTEGIETEEQCRILMQM 619
           L    F+++KID+   S L       A+V    + AE+ G K+  EG+E  +Q   L   
Sbjct: 661 LTHVAFDKIKIDREFVSGLPTNPMCSAIVNTIIDMAEQIGLKVTAEGVENRDQVEALKLS 720

Query: 620 GIRFGQGYLYSPAVPLDRLLPRRA 643
           G    QGY ++   PL R+   RA
Sbjct: 721 GCDEAQGYYFAEPAPLARIFKNRA 744