Pairwise Alignments

Query, 355 a.a., secretion protein from Agrobacterium fabrum C58

Subject, 425 a.a., putative Multidrug efflux MFS membrane fusion protein from Pseudomonas putida KT2440

 Score =  206 bits (524), Expect = 9e-58
 Identities = 136/351 (38%), Positives = 195/351 (55%), Gaps = 18/351 (5%)

Query: 12  LVLLGGIAGVALVLYAWRLPPFLSTVEMTDNAFVRGYVTTMSPQVSGYVVNVPVKDYQEV 71
           ++  G +A + L+ +          +E TD+A+VR     +SP+V+GYV  V V D Q V
Sbjct: 71  VIASGSLAAITLLAFTSYWFSTGRYLETTDDAYVRADWVALSPRVAGYVAKVEVADDQPV 130

Query: 72  KQGTLLAKIDDRIYHQKQAQAEATLDTHKAALDNSRQQENAANANIRS-------SEAAV 124
           K G +L ++ +R Y  +  QA A +   +AAL  ++  +  A   I         +EA V
Sbjct: 131 KAGDVLVRLQNRDYRARLDQARAGVTEAQAALAAAQASQQVATERIDQQQQAILQAEAVV 190

Query: 125 DSAEASLKQAQLASDRQDNLIKSGVGTSSLQEEAHAALEKARASLSQAKAALEVSRQDLQ 184
            SA A  ++++L   R   L++    T    E A A   +A+A+L  A+AAL   R  L 
Sbjct: 191 RSATAEQRRSELDVQRYRGLVRDDAATVQRLETASAHASQAQAALQGAQAALRQQRSQLA 250

Query: 185 TIIVNRSSLQA-------AVANAEAAVELARIDLANTEIRAPVDGRLGEVGVRTGQYVTA 237
                 +  +A       A+A A+A  +LA  D  +T IRAP+ G +G+  VRTGQYV  
Sbjct: 251 MAKARAAQAEAELQQRAAALARAQAHQQLAEQDEQDTVIRAPITGVVGQRRVRTGQYVVP 310

Query: 238 GTQLMAVVP-HDVWVIANFKETQLAGMQVGQPVTISVDALHRRKLTGHVERFSPATGSEF 296
           G  L+AVVP    +V+AN+KETQLA M+ GQPV I VD+   + L GHV  FSPA+G+ F
Sbjct: 311 GQPLLAVVPLQQAYVVANYKETQLARMRPGQPVEIRVDSFASQPLHGHVASFSPASGNVF 370

Query: 297 AVIKPDNATGNFVKIAQRLGVRIVIDADQPL-AAELSPGMSVVVHLDKSKA 346
           A++  DNATGNF KI QR  VRI++  D+PL   ++ PGMSVV  +D   A
Sbjct: 371 ALLPSDNATGNFTKIVQRFPVRILL--DKPLDGPQVLPGMSVVSTVDTRPA 419