Pairwise Alignments

Query, 355 a.a., secretion protein from Agrobacterium fabrum C58

Subject, 367 a.a., putative Multidrug efflux MFS membrane fusion protein from Pseudomonas putida KT2440

 Score =  226 bits (577), Expect = 6e-64
 Identities = 130/320 (40%), Positives = 191/320 (59%), Gaps = 2/320 (0%)

Query: 38  EMTDNAFVRGYVTTMSPQVSGYVVNVPVKDYQEVKQGTLLAKIDDRIYHQKQAQAEATLD 97
           + T++A+V    T ++P+V+G++  V V+D Q+V  G LLA ID R Y      A+A L 
Sbjct: 48  QSTNDAYVTADYTVVAPKVAGFIKQVLVEDNQQVTAGQLLATIDARDYQAALDAAQAQLL 107

Query: 98  THKAALDNSRQQENAANANIRSSEAAVDSAEASLKQAQLASDRQDNLIKSGVGTSSLQEE 157
             +A   ++R      +A I  +EAAV +A+A +  A    +R   L + G GT    ++
Sbjct: 108 VAQAQSADARATLERQDALIAQAEAAVKAAQAEVAFADHEVNRYSRLAEQGAGTVQNAQQ 167

Query: 158 AHAALEKARASLSQAKAALEVSRQDLQTIIVNRSSLQAAVANAEAAVELARIDLANTEIR 217
           A +A+++ARA L+ A+AA   +R+ +  +    +S    +  AEA +E A++DL+ T I 
Sbjct: 168 ARSAVDQARARLANAQAARVAARKQVDILTAQVASADGQLKRAEAGLEKAQLDLSYTRIT 227

Query: 218 APVDGRLGEVGVRTGQYVTAGTQLMAVVP-HDVWVIANFKETQLAGMQVGQPVTISVDAL 276
           APVDG +GE  +R G YV  G +L++VVP    +V+ NF+ETQL  +Q GQPV ISVD  
Sbjct: 228 APVDGMVGERALRVGAYVNPGARLLSVVPLQQAYVVGNFQETQLTHVQPGQPVRISVDTF 287

Query: 277 HRRKLTGHVERFSPATGSEFAVIKPDNATGNFVKIAQRLGVRIVIDADQPLAAELSPGMS 336
               L GHV+  +PATG  FA +KPDNATGNF K+ QR+ V+IV+D  QPL   L  GMS
Sbjct: 288 SGETLQGHVQSIAPATGVTFAAVKPDNATGNFTKVVQRIPVKIVLDDGQPLLTRLRVGMS 347

Query: 337 VVVHLD-KSKAPDGAETAAK 355
           V   +D +    DG E +A+
Sbjct: 348 VEATIDTRGDKLDGKEVSAR 367