Pairwise Alignments

Query, 540 a.a., MFS permease from Agrobacterium fabrum C58

Subject, 510 a.a., Inner-membrane proton/drug antiporter (MSF type) of tripartite multidrug efflux system from Variovorax sp. SCN45

 Score = 66.2 bits (160), Expect = 3e-15
 Identities = 104/499 (20%), Positives = 195/499 (39%), Gaps = 44/499 (8%)

Query: 32  ITQGLGMNLVMANIYQLQGEFSATVAEVAWLSAAYMAPYATFSIALFKVRAQYGLRPFAE 91
           I Q L   +    +  +QG   A+  ++ W+  +Y+   A        +   +G R    
Sbjct: 24  IMQALDTTIANVALPHMQGSLQASQDQITWVLTSYIVASAIALPLTGWLCGHWGRRRVFI 83

Query: 92  LSIIAFVVASCLNLFVTDLHSAIVIRFVSGMAAAPISSLGFLYILEAFPPARKFSLGFSI 151
           +S+I F VAS L    T L   +  R + G+  A +  L    +L+   P  K     +I
Sbjct: 84  ISVIGFTVASALCGLATSLVGIVAARLLQGIFGAALVPLSQAVLLD-INPREKVGQAMAI 142

Query: 152 ALTGTLLSAPLARIVSPSLLEIDGWNALYSMEVGFALISLAVIYVLKVTPPPRAKVIERM 211
              G ++   L  ++   L E   W  ++ + +   +   A   + +  P  R +  E++
Sbjct: 143 WGAGIMVGPILGPLLGGWLTENFDWRWVFFINLPVGIF--AFWGIARYLPESRPQG-EKL 199

Query: 212 DILSYVLFAGGLGCLAVMLTLGRFYWWFETWWLGALLATSIALLTLMAFIE---LPRKNP 268
           DI  +V  +  +G L + L  G    WF++W +   L  + AL+    F+      +   
Sbjct: 200 DIFGFVTLSLAIGMLQLFLDRGEQLDWFDSWEI--KLEAAAALVAFGFFVVHTWTVQGVS 257

Query: 269 LLDLRWIFSKTNLHVMAVLLIYRAVSSEQSSTAVSFYQQLGLLNDQTTTLYALVLLATVL 328
             D   +  +  +  +    I   +     +   +F Q  GL+      +Y   + A   
Sbjct: 258 FFDRDLLKDRNFVTGLLFAFIVGMILFATMALLPNFLQ--GLMG--YPVVYTGQVTAPRG 313

Query: 329 GGAACAWLMLSKYVDTAHVIALTLIAAG--SFLDSQSTNMTRPEQMYFSQMMIAFGAAMF 386
            G   A +++ + V    V A+  +  G  +F   Q T +T                 M 
Sbjct: 314 VGTMIAMIIVGRLVQKVDVRAIMAVGFGLTAFSLYQMTRLT---------------LQMD 358

Query: 387 LPPVMAKGFAAALGRGAPYLVNFIAIF------LFTQITGSMLMTGLLGSFVTLREKFHS 440
              ++  GF   LG G  ++    A F      L  Q T    +   +GS V +      
Sbjct: 359 STLIIVSGFIQGLGIGFTFVPLSTATFATLAPRLRNQGTPIFSLLRNIGSSVGI--SIVQ 416

Query: 441 NILVENILLTNPLVAQRVSQLSGAYSHVITDPALLKAE---GLTLLAQQVSREAYVLAYN 497
            +L E     +  +A  V+  + A S   T P ++  +   GL LL  +V+R+  ++ Y 
Sbjct: 417 ALLTEGSSKAHAQIAATVAPGNQALS---TLPQMMSPDTMTGLALLNAEVTRQGALVGYL 473

Query: 498 DTFLLISVVSALALAVLLI 516
           D F ++ +++ LA+ +LL+
Sbjct: 474 DDFAIMMIITVLAIPLLLL 492