Pairwise Alignments

Query, 540 a.a., MFS permease from Agrobacterium fabrum C58

Subject, 511 a.a., multidrug efflux transport system - permease subunit from Pseudomonas putida KT2440

 Score = 71.2 bits (173), Expect = 9e-17
 Identities = 100/458 (21%), Positives = 184/458 (40%), Gaps = 45/458 (9%)

Query: 87  RPFAELSI-----IAFVVASCLNLFVTDLHSAIVIRFVSGMAAAPISSLGFLYILEAFPP 141
           R F E+ +     + FV+AS L      +   +  R + G+ A P+  +    ++  +PP
Sbjct: 76  RRFGEVKLFIWATLLFVLASFLCGIAQSMPELVGFRVLQGVVAGPLYPMTQTLLIAVYPP 135

Query: 142 ARKFSLGFSIALTGTL-LSAPLAR-IVSPSLLEIDGWNALYSMEVGFALISLAVIYVLKV 199
           A++   G ++AL   + + AP+A  I+   + +   W  ++ + V   L + AV+     
Sbjct: 136 AKR---GMALALLAMVTVVAPIAGPILGGWITDSYSWPWIFFINVPIGLFAAAVVRQQMR 192

Query: 200 TPPPRAKVIERMDILSYVLFAGGLGCLAVMLTLGRFYWWFETWWLGALLATSIALLTLMA 259
           T P      + MD +  +    G+G L V+L  G    WFE+ ++      S+  L +  
Sbjct: 193 TRPVVTSR-QPMDYIGLLTLIIGVGALQVVLDKGNDLDWFESSFIIVGSLISVVFLAVFV 251

Query: 260 FIELPRKNPLLDLRWIFSKTNLHVMAVLLI--YRAVSSEQSSTAVSFYQQLGLLNDQTTT 317
             EL  ++P+++LR +F   N  +  ++L+  Y                Q+G        
Sbjct: 252 IWELTDRHPVVNLR-LFVHRNFRIGTIVLVGGYAGFFGINLILPQWLQTQMGYTATWAGL 310

Query: 318 LYALVLLATVLGGAACAWLMLSKYV---DTAHVIALTLIAAGS--FLDSQSTNMTRPEQM 372
             A + L  V+         + KY    D   +  L  +A G+  ++ +  T+    + +
Sbjct: 311 AVAPIGLLPVIMSP-----FVGKYAHRFDLRVLAGLAFLAIGTSCYMRAGFTSEVDFQHV 365

Query: 373 YFSQMMIAFGAAMFLPPVMAKGFAAALGRGAPY-LVNFIAIFLFTQITGSMLMTGLLGSF 431
              Q+ +  G A+F  P +    +  L    P+ + +   +  F +  G      L    
Sbjct: 366 ALVQLFMGIGVALFFMPTL----SILLSDLPPHQIADGSGLATFLRTLGGSFAASLTTWI 421

Query: 432 VTLREKFHSNILVENILLTNPLVAQRVSQLSGAYSHVITDPALLKAEGLTLLAQQVSREA 491
              R   H   L E+I   +P     + QL GA             +    L Q ++ +A
Sbjct: 422 WIRRADQHHAYLSEHISQFDPTTRHTLEQLGGA-----------SPQSYAQLEQILNGQA 470

Query: 492 YVLAYNDTFLLISVVSALALAVLLIHLVWMRVRPFLSR 529
           Y+++  D F L+S V A      LI LVW    PF ++
Sbjct: 471 YMMSTVDYFTLMSWVFA-----GLILLVWFAKPPFTAK 503