Pairwise Alignments

Query, 540 a.a., MFS permease from Agrobacterium fabrum C58

Subject, 504 a.a., putative EmrB/QacA family drug resistance transporter from Pseudomonas putida KT2440

 Score = 96.7 bits (239), Expect = 2e-24
 Identities = 112/520 (21%), Positives = 218/520 (41%), Gaps = 40/520 (7%)

Query: 11  QPVERPLWLRLCFIFAGLSFFITQGLGMNLVMANIYQLQGEFSATVAEVAWLSAAYMAPY 70
           QPV    W+    +  GL      G+ +++  A + +++G   A+  E +W+S AY+   
Sbjct: 5   QPVSLRAWVA---VLGGLFGCFMAGMNVHVTSAALPEIRGSLGASFEEGSWISTAYLVAE 61

Query: 71  ATFSIALFKVRAQYGLRPFAELSIIAFVVASCLNLFVTDLHSAIVIRFVSGMAAAPISSL 130
                    +   + LR       + F++AS    +  +L + IVIR + G A A +  L
Sbjct: 62  IVMIPLTAWLVDVFSLRRVMWTGSLIFLIASVACSWAPNLEAMIVIRVIQGAAGAVLIPL 121

Query: 131 GFLYILEAFPPARKFSLGFSIALTGTLLSAPLARIVSPSLLEIDGWNALYSMEV--GFAL 188
            F  I+   P A K ++G ++      ++      +   L +   W  ++ +++  G AL
Sbjct: 122 SFQLIITELP-ASKMAMGMALFSLANSVAQAAGPSIGGWLTDAYSWRWIFYLQLFPGIAL 180

Query: 189 ISLAVIYVLKVTPPPRAKVIERMDILSYVLFAGGLGCLAVMLTLGRFYWWFETWWLGALL 248
           + LA+ + ++  P  + +++ + D L       GLG L ++L  G    WF +  +  + 
Sbjct: 181 L-LAIAWSIEAKPM-KLELLRKGDWLGIAAMVIGLGGLQIVLEEGGRLDWFGSPLIVGMS 238

Query: 249 ATSIALLTLMAFIELPRKNPLLDLRWIFSKTNLHVMAV-LLIYRAVSSEQSSTAVSFYQQ 307
             +   L +    +L  +   ++LR +    N  V +V + I+ A +        ++  Q
Sbjct: 239 VVAAIALVVFVVTQLFGQRAFINLR-LLGHYNFGVASVAMFIFGAATFGLVFLVPNYLSQ 297

Query: 308 L----------GLLNDQTTTLYALVLLATVLGGAACAWLMLSKYVDTAHVIALTLIAAGS 357
           L           L+      L    L+  ++G  +  +++ S ++         ++A G 
Sbjct: 298 LQGFSAHDVGVALIAYGVVQLLLAPLMPRLMGWTSAKFMVASGFL---------IMALGC 348

Query: 358 FLDSQSTNMTRPEQMYFSQMMIAFGAAMFLPPVMAKGFAAALGRGAPYLVNFIAIFLFTQ 417
           +L +  +  +    +  S ++   G    +   +A    A  G       +  A+F   +
Sbjct: 349 WLGAGLSADSADNVIIPSTVVRGIGQPFIM---VALSVLAVAGLDKREAGSASAVFSMLR 405

Query: 418 ITGSMLMTGLLGSFVTLREKFHSNILVENILLTNPLVAQRVSQLSGAYSHVITDPALLKA 477
             G  + T  L   V  RE+FHS  + E + L  P V  R++Q     S +     +L+A
Sbjct: 406 NLGGAIGTAGLTQLVATRERFHSERIHEQVTLFEPSVQARINQT--VQSWLPPQQQMLEA 463

Query: 478 EGLTLLAQQVSREAYVLAYNDTFLLISV-VSALALAVLLI 516
                L   + REAY++AY+D F L  + +   ALA LL+
Sbjct: 464 -----LEATIRREAYLMAYSDAFYLACLALVGCALAALLL 498