Pairwise Alignments

Query, 540 a.a., MFS permease from Agrobacterium fabrum C58

Subject, 513 a.a., putative Multidrug efflux MFS transporter from Pseudomonas putida KT2440

 Score =  100 bits (250), Expect = 1e-25
 Identities = 130/532 (24%), Positives = 215/532 (40%), Gaps = 45/532 (8%)

Query: 4   AAIPAAPQPVERPLWLRLCF-IFAGLSFFITQGLGMNLVMANIYQLQGEFSATVAEVAWL 62
           AA PA   P +    L++   +F  L   +  GL  ++   ++  ++G       E AWL
Sbjct: 12  AAAPAPAAPAQTAFGLQVVVGLFGVLLAVLCAGLNESVTKISLADIRGAMGIGADEGAWL 71

Query: 63  SAAYMAPYATFSIALFKVRAQYGLRPFAELSIIAFVVASCLNLFVTDLHSAIVIRFVSGM 122
            A Y A   +       +   + LR F   ++  F V   L  F  +LHS +++R + G 
Sbjct: 72  LAVYSAASVSAMAFAPWLATTFSLRRFTMSAVGLFAVLGLLQPFAPNLHSLMLLRVLQGF 131

Query: 123 AAAPISSLGFLYILEAFPPARKFSLGFSIALTGTL---LSAPLARIVSPSLLEIDGWNAL 179
           AA  +  +     L   PP  K       ALT T    L  PLA + +    E  GW   
Sbjct: 132 AAGALPPMLMSVALRFLPPGIKVYGLACYALTATFGPNLGTPLAGLWT----EYVGWQWA 187

Query: 180 YSMEVGFALISLAVIYVLKVTPPPRAKVIERMDILSYVLFAGGLGCLAVMLTLGRFYWWF 239
           +   +  +L+++  +       P R +  ++ D    +L    + C  + L+LG  + WF
Sbjct: 188 FWQIILPSLLAMVCVGWGLPQDPLRLERFKQFDWRGVLLGLPAISCTVLGLSLGDRWGWF 247

Query: 240 ETWWLGALLATSIALLTLMAFIELPRKNPLLDLRWIFSKTNLHVMAVLL--IYRAVSSEQ 297
           ++  +  LL   + LL L  + E     P   LR +  + NL    V L  +   +S   
Sbjct: 248 DSPLICWLLGGGLLLLVLFMYNEWSEPLPFFQLR-LLQRRNLSFALVTLAGVLVVLSGVG 306

Query: 298 SSTAVSFYQQLGLLNDQTTTLYALVLLATVLGGAACAWLMLSKYVDTAHV--IALTLIAA 355
           S  +    Q  G    QT+ L  LV +  ++     A L   + VD   V  I L ++A 
Sbjct: 307 SIPSAYLAQIQGYRPAQTSPLMMLVAMPQLIALPLTAALCNIRAVDCRWVLGIGLAMLAV 366

Query: 356 GSFLDSQSTNMTRPEQMYFSQMMIAFGAAMFLPPVMAKGFAAALGRGAPYLVNFIAIFLF 415
                S  T+       Y   ++  FG  M + P++         +  P+  ++     F
Sbjct: 367 SCVGSSLLTSEWIRGDFYPFYLLQVFGQPMAVLPLLMLSTNGMTPQEGPFASSW-----F 421

Query: 416 TQITG--SMLMTGLLGSFVTLREKFHSNILVENILLTNPLVAQRVSQLSGAYSHVITDPA 473
             + G  +++  GLL    TLR  FHSN LV++ L   PLV    +              
Sbjct: 422 NTVKGLAAVIAGGLLDVLGTLRRHFHSNHLVDS-LGNAPLVDGNAAG------------- 467

Query: 474 LLKAEGLTLLAQQVSREAYVLAYNDTFLLISVVSALALAVLLIHLVWMRVRP 525
                    LA+++  +A VL   D +L+++ + A+AL + LI  V  RV P
Sbjct: 468 ---------LAKRIHDQAQVLTSADLYLVLACI-AVAL-ICLIPFVPTRVYP 508