Pairwise Alignments

Query, 273 a.a., transcriptional regulator, AraC family from Agrobacterium fabrum C58

Subject, 269 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  125 bits (313), Expect = 1e-33
 Identities = 94/265 (35%), Positives = 129/265 (48%), Gaps = 11/265 (4%)

Query: 12  WRDRRFGGMECLSATFLTHEYSPHAHDTFSIGAIESG-SQISTIQGTTEQTGPGHLYLIN 70
           WRD     +E   A      Y  H+H TFSIGA+++G S  +      +   PG L L+ 
Sbjct: 9   WRDPALAHVESRRACHSRACYKAHSHPTFSIGAVDAGRSHFTGAADGQQHLAPGTLVLVP 68

Query: 71  PDEVHDGAPGGG-GYRYRMIYPDAELLRDI-IEDVTGRVFHGMPSFPKFLPRDPQMAASF 128
              VH   P  G  + Y+M++ DA+ L  + +E   G +  G P     + R+ ++   F
Sbjct: 69  AHRVHACNPAPGLAWSYQMLHVDADWLTQLRLESGLGGIEAGEPVR---ICREAEVYRQF 125

Query: 129 QMAHRRLEAKTGALEADEGMFSVLAAL-FGRHGSAIILAVETREKTAVYNARDYLTDNYE 187
              +R L +     E D  + + L  L F  H     LA     + A  N      ++ +
Sbjct: 126 CALNRLLFSSACNGEKDAALIAFLGDLDFSAHPP---LAAAPALQAATLNGLLARIEHQD 182

Query: 188 -TDIGLEELASIAGLSRAHLIRAFRKEFHITPHAYLTDVRIRQARRLLRAGEMPAEVAAL 246
              + LE LA  AGL R  LIRAFR     TPHAYL + R+ + R+LL  G   AEVA  
Sbjct: 183 PAQLSLEVLAREAGLGRYQLIRAFRAATGFTPHAYLLNARVNRGRQLLSEGLALAEVAYQ 242

Query: 247 CGFADQAHFTRHFKARTGVTPGQFR 271
            GFADQ+HF R FKA  GVTPGQ+R
Sbjct: 243 LGFADQSHFQRVFKAHVGVTPGQYR 267