Pairwise Alignments

Query, 468 a.a., DNA repair protein from Agrobacterium fabrum C58

Subject, 455 a.a., DNA repair protein RadA from Pseudomonas simiae WCS417

 Score =  413 bits (1061), Expect = e-120
 Identities = 216/432 (50%), Positives = 289/432 (66%), Gaps = 4/432 (0%)

Query: 1   MAKAKTQFVCQNCGTVHNRWAGKCEGCGEWNTIVEED-PMGGIGSGPGKVPKKGRPVTLT 59
           MAKAK  + C  CG    +WAG+C  CG WNT+ E     GG  +  G+    G+   + 
Sbjct: 1   MAKAKRMYGCTECGATFPKWAGQCTECGAWNTLTETMIESGGAAAPTGRAGWTGQQAQIK 60

Query: 60  SLSG-EIEEAPRIPTGISELDRATGGGFVRGSAVLIGGDPGIGKSTLLMQAAAALSRRGH 118
           +L+   +EE PR  T   ELDR  GGG V GS VLIGGDPGIGKST+L+Q   +++ R  
Sbjct: 61  TLAEVSVEEIPRFSTASGELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCSIASR-M 119

Query: 119 RVIYVSGEEAVAQVRLRAQRLGSADTDVLLAAETNVEDILATVSEGKRPDLIIIDSIQTL 178
             +YV+GEE+  QV +RA+RLG     + +  ET +E I+AT +  ++P +++IDSIQT+
Sbjct: 120 PALYVTGEESQQQVAMRARRLGLPQDQLRVMTETCIESIIAT-ARIEKPKVMVIDSIQTI 178

Query: 179 WSDTADSAPGTVTQVRTGVQAMIRFAKQTGATMVLVGHVTKEGQIAGPRVVEHMVDAVLY 238
           +++   SAPG V+QVR     ++R+AKQ+G  + LVGHVTKEG +AGPRV+EHMVD VLY
Sbjct: 179 FTEQLQSAPGGVSQVRESAALLVRYAKQSGTAIFLVGHVTKEGALAGPRVLEHMVDTVLY 238

Query: 239 FEGDRGHHYRILRTVKNRFGPTDEIGVFEMSDGGLREVSNPSELFLGERNEKSPGAAVFA 298
           FEG+     R+LR VKNRFG  +E+GVF M+D GL+EVSNPS +FL    E+ PG+ V A
Sbjct: 239 FEGESDGRLRLLRAVKNRFGAVNELGVFAMTDRGLKEVSNPSAIFLTRAQEEVPGSVVMA 298

Query: 299 GIEGTRPVLVEVQALVAATSLGTPRRAVVGWDSSRLAMILAVLEAHCGVKLGQHDVYLNV 358
             EGTRP+LVEVQALV  + L  PRR  +G D +RLAM+LAVL  H G+     DV+LNV
Sbjct: 299 TWEGTRPMLVEVQALVDDSHLANPRRVTLGLDQNRLAMLLAVLHRHGGIPTHDQDVFLNV 358

Query: 359 AGGYRISEPAADMAIASALVSSLAGLALPADCVYFGEISLSGAVRPVAHTVQRLKEAEKL 418
            GG ++ E A+D+A+ +A++SSL    LP D + FGE+ LSG VRPV    +RLKEA K 
Sbjct: 359 VGGVKVLETASDLALMAAVMSSLRNRPLPHDLLVFGEVGLSGEVRPVPSGQERLKEAAKH 418

Query: 419 GFSAALLPSGSA 430
           GF  A++P G+A
Sbjct: 419 GFKRAIVPKGNA 430