Pairwise Alignments

Query, 468 a.a., DNA repair protein from Agrobacterium fabrum C58

Subject, 461 a.a., DNA repair protein RadA from Dickeya dadantii 3937

 Score =  366 bits (939), Expect = e-105
 Identities = 197/446 (44%), Positives = 278/446 (62%), Gaps = 21/446 (4%)

Query: 1   MAKA-KTQFVCQNCGTVHNRWAGKCEGCGEWNTIVE-----------EDPMGGIGSGPGK 48
           MAKA K  FVC  CG  + RW G+C  C  WNTI E            D   G     G 
Sbjct: 1   MAKAVKRAFVCNECGADYPRWQGQCSACHAWNTITEVRLAAASSSSRSDRFSGYAGDGGN 60

Query: 49  VPKKGRPVTLTSLSGEIEEAPRIPTGISELDRATGGGFVRGSAVLIGGDPGIGKSTLLMQ 108
           V    R   L+ +S  +E  PR  TG  E DR  GGG V GSA+LIGG+PG GKSTLL+Q
Sbjct: 61  V---SRVQKLSEIS--LEALPRFSTGFQEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQ 115

Query: 109 AAAALSRRGHRVIYVSGEEAVAQVRLRAQRLGSADTDVLLAAETNVEDILATVSEGKRPD 168
               L+ +  + +YV+GEE++ QV +RA RLG     + + +ET++E I   ++E ++P 
Sbjct: 116 TLCKLAEQ-MKTLYVTGEESLQQVAMRAHRLGLPAQHINMLSETSIEQI-CLIAEQEQPK 173

Query: 169 LIIIDSIQTLWSDTADSAPGTVTQVRTGVQAMIRFAKQTGATMVLVGHVTKEGQIAGPRV 228
           L++IDSIQ +      S+PG+V QVR     + RFAK  G  +++VGHVTK+G +AGP+V
Sbjct: 174 LMVIDSIQVMHLADIQSSPGSVAQVRETAAYLTRFAKTRGVAIIMVGHVTKDGSLAGPKV 233

Query: 229 VEHMVDAVLYFEGDRGHHYRILRTVKNRFGPTDEIGVFEMSDGGLREVSNPSELFLGERN 288
           +EH +D  +  +GD    +R LR+ KNRFG  +E+GVF M++ GLRE+SNPS +FL   +
Sbjct: 234 LEHCIDCSVLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREISNPSAIFLSRGD 293

Query: 289 EKSPGAAVFAGIEGTRPVLVEVQALVAATSLGTPRRAVVGWDSSRLAMILAVLEAHCGVK 348
           E + G++V    EGTRP+LVE+QALV  + +  PRR  VG + +RLA++LAVL  H G++
Sbjct: 294 EITSGSSVMVVWEGTRPLLVEIQALVDQSMMANPRRVAVGLEQNRLAILLAVLHRHGGLQ 353

Query: 349 LGQHDVYLNVAGGYRISEPAADMAIASALVSSLAGLALPADCVYFGEISLSGAVRPVAHT 408
           +   DV++NV GG +++E +AD+A+  +LVSS     LP D V FGE+ L+G +RPV   
Sbjct: 354 MSDQDVFVNVVGGVKVTETSADLALLLSLVSSFRDRPLPQDLVVFGEVGLAGEIRPVPSG 413

Query: 409 VQRLKEAEKLGFSAALLPSGSAELPK 434
            +R+ EA K GF  A++P   A +PK
Sbjct: 414 QERITEAAKHGFKRAIVP--FANMPK 437