Pairwise Alignments

Query, 302 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 304 a.a., putative permease (RarD protein) from Pseudomonas putida KT2440

 Score =  130 bits (327), Expect = 4e-35
 Identities = 81/279 (29%), Positives = 147/279 (52%), Gaps = 3/279 (1%)

Query: 14  DSARGFAFALSAYLLWGFLPFYMKAVAHISPIEVIVHRVIWSVPIAAVVLIALGRTAEIR 73
           D+A G + AL++  L G    Y KA+A +  + ++  RV+ S+    ++L A      + 
Sbjct: 7   DAAAGLSAALASNCLLGLSSLYWKALAALPALALLGCRVLMSLLCVTLLLAARKELVPLL 66

Query: 74  TALRNPKMLAMASLTAALISINWGVYIWSIGAGRALDAALGYFINPLFSIFLGAVLLKEK 133
             L+  + +A+    A L++ NWG +IW+   G  L++ LGY I P+  I LG +L +E+
Sbjct: 67  CVLKR-RDIALHGAAAVLVAGNWGTFIWASIHGHVLESGLGYLIAPVLGISLGLLLYQER 125

Query: 134 L-YPAQIAAICLVGLAVAILTWHAGSLPWVSIALTVSWGFYAFFRKTLPIGATQGFLLEV 192
           L  P  ++   ++G  V +L    G    V + + V+WG Y + +K   +    G  LE 
Sbjct: 126 LSVPRGLSLTMVIGSVVYLLFEKGGLDSRVFLVIGVTWGTYTWLKKLARLPPWSGLFLES 185

Query: 193 MLLSIPAVLVMIWLAFSGQAHFMGGNSADTWLLAASGVITAVPLILYGNGAKLLRLSTIG 252
           ++L +  + +++W++ +  A      SADT LL   G ++ +PL L+   A+ L LS +G
Sbjct: 186 LVLGVLLMPLILWVS-TPVAGIAALGSADTALLLLCGAVSLLPLALFSFAARRLPLSVMG 244

Query: 253 IMQYIAPTMIFLIAIFIFKEPFDMVRMAAFAMIWVALAI 291
           +MQ++ P   F +A+  + +      M AFA+I +A+ +
Sbjct: 245 LMQFVLPLTQFFVALMFYGQIPSHGAMLAFALIALAMLL 283