Pairwise Alignments

Query, 302 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 295 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  226 bits (575), Expect = 6e-64
 Identities = 114/289 (39%), Positives = 173/289 (59%), Gaps = 6/289 (2%)

Query: 17  RGFAFALSAYLLWGFLPFYMKAVAHISPIEVIVHRVIWSVPIAAVVLIALGRTAEIRTAL 76
           RG+   LSAY++WG  P Y KA+  +  +E+IVHRV+WS    +++L+        R   
Sbjct: 8   RGYILGLSAYIIWGLFPLYFKAIQSVPAVEIIVHRVLWSALFGSLLLLVWKHPGWWRELR 67

Query: 77  RNPKMLAMASLTAALISINWGVYIWSIGAGRALDAALGYFINPLFSIFLGAVLLKEKLYP 136
            NP+ L + +L+ ALI+ NW  Y+WS+  GR L+A+LGY+INPL ++ LG ++L E+L  
Sbjct: 68  NNPRRLGILALSGALIAGNWLTYVWSVNNGRMLEASLGYYINPLINVLLGMLILGERLRR 127

Query: 137 AQIAAICLVGLAVAILTWHAGSLPWVSIALTVSWGFYAFFRKTLPIGATQGFLLEVMLLS 196
            Q  A+ +  + VA   W  GSLPWVS+ L +S+GFY   RK  P+ A  G ++E  +L 
Sbjct: 128 LQWLAVGMAAVGVAQQVWQVGSLPWVSLVLALSFGFYGLIRKQAPVAALPGLVVETWML- 186

Query: 197 IPAVLVMIWL---AFSGQAHFMGGNSADTWLLAASGVITAVPLILYGNGAKLLRLSTIGI 253
           +P  L  + L   A S Q  F   + A  WL+AA G +T VPL+ +   A+ L  +T+G 
Sbjct: 187 VPLALGWLLLHPTAMSAQGAFYTSSEA-LWLMAA-GPVTLVPLVCFNAAARHLPYTTLGF 244

Query: 254 MQYIAPTMIFLIAIFIFKEPFDMVRMAAFAMIWVALAIYTGSSLMRLKR 302
           +QY+APT++ L A+ +F E      +AAF  IW  LAIY+  + + L++
Sbjct: 245 LQYLAPTLVLLQAVVLFDEHLSSSTLAAFMFIWAGLAIYSVDAWLNLRK 293