Pairwise Alignments

Query, 628 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

Subject, 595 a.a., lipid A export permease/ATP-binding protein MsbA from Magnetospirillum magneticum AMB-1

 Score =  313 bits (802), Expect = 1e-89
 Identities = 200/538 (37%), Positives = 301/538 (55%), Gaps = 20/538 (3%)

Query: 77  PAFLLGAVALVIAYNLTRLIQVGLNQLRDSLFASVGQHAVRQLAYRTFVHMHRLSLRFHL 136
           P FLL     V+    T  ++   N       + VG   +  +  R F H+ RL + F  
Sbjct: 65  PEFLLPLALAVLG---TFAVKSVCNYGEAVFLSKVGLRVIADMQSRLFAHLMRLDVAFFH 121

Query: 137 ERKTGGLSRVIERGTKGIETIVRFTILNTAPTFIEFLLTAIIFWASYGFSYVLVTVVTVW 196
              TG   R++ R T  I  + RF + + A T      +++IF    G  +     ++ W
Sbjct: 122 ANSTG---RILSRLTNDISQM-RFAV-SDALTGAGKDASSVIFLI--GAMFYQDWRLSAW 174

Query: 197 AYIWFTVRASNWR-IGIRRAMNDSDTDANTKAIDSLLN-----FETVKYFGNEEMEARRF 250
            +  F +     R +G R     ++T  +   + + L         VK +G EE E R+ 
Sbjct: 175 TFFIFPIAILPIRKLGRRMRKVTANTQEHMGQLTTYLEQAVQGIRVVKAYGMEEYEKRKV 234

Query: 251 DVAMERYEKSAISIWTSLGWLNFGQGVIFGIGSTIMMVMSALAVQRGEQTIGDFV-FVNA 309
              +E  +             +    ++ GI  T++++     V  GE T G F  F+ A
Sbjct: 235 GALVEMLQDLIYKAARVRSASSPIMELLGGIAITVVILYGGTRVVNGETTPGAFFSFITA 294

Query: 310 LLLQLSVPLNFIGFVYREIRQGLTDIEQMFDLLEVEAEVTDRPDAKPLAAGPGAISFRDV 369
           L+L    P+  +  +   +++GL    + F +L+ +  + ++  A  L    G +SF  V
Sbjct: 295 LMLAYR-PIKSLAAMNTNLQEGLAAASRTFSVLDTQPTIFEKDGAADLVVLEGNVSFEGV 353

Query: 370 HFAYDPERPILKGVSFDVPAGKTVAIVGPSGAGKSTISRLLYRFYDIQEGAVTIDGQDIR 429
            F YD  + +L G+   VP GKTVA+VGPSGAGKST+  LL RFYD+ +G V +DGQD+R
Sbjct: 354 FFTYDGSKAVLDGIDLAVPGGKTVALVGPSGAGKSTVLNLLPRFYDVTDGHVLVDGQDVR 413

Query: 430 DVTQKSLRSMIGMVPQDTVLFNDTLAYNIRYGRPSATDEELKAAADAAQISAFIGKLPDG 489
           +V+  SLRS I +V Q+  LF+D++  NI YGR  ATDEE++AAA +A    FI  LP+G
Sbjct: 414 NVSLSSLRSKIALVSQEITLFDDSIRANIAYGRFGATDEEIEAAARSAAAHDFIVSLPEG 473

Query: 490 YATMVGERGLKLSGGEKQRVAIARTILKAPPILILDEATSALDTHTEQEIQSALDIVSKN 549
           Y T+VGERGL LSGG++QR+AIAR +LK  PIL+LDEATSALDT +E+++Q+AL+++ + 
Sbjct: 474 YDTVVGERGLNLSGGQRQRLAIARAMLKNAPILLLDEATSALDTESERQVQTALELLMRG 533

Query: 550 RTTLVIAHRLSTVIHADEIIVLKEGLIAERGTHASLMAHDGLYASMWSRQ--REAIRA 605
           RTT+VIAHRLSTV++AD I VL +G + E G H +LMA +G YA +++ Q   EA++A
Sbjct: 534 RTTIVIAHRLSTVVNADLIHVLDKGRVIESGDHNALMAKNGTYARLYAMQFAEEAVKA 591