Pairwise Alignments

Query, 628 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

Subject, 600 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  296 bits (757), Expect = 2e-84
 Identities = 207/583 (35%), Positives = 299/583 (51%), Gaps = 31/583 (5%)

Query: 32  WDLKMRVIWATVFLIVAK-LVLIAVPYFFKWATDALNGKLDMAGLVPAFLLGAVALVIAY 90
           W  +  ++   + L+VA  L  + VP F     DA+ G    A       L A  +V+A 
Sbjct: 24  WSHRKALVGFIIVLVVASTLAEVMVPVFSGRIVDAIAGDNGGANAGDG-ALRAFVIVVAL 82

Query: 91  NLTRLIQVGLNQLRDSLFASVGQHAVRQLAYRT---FVHMHRLSLRFHLERKTGGLSRVI 147
             T ++      LR  +F  + +  ++ +A  T   F  + R S  +H     G   R I
Sbjct: 83  GFTSVV------LRWFIFNGIIRLTLKTMADVTNNGFHKVQRFSTDWHANSFAGSTVRKI 136

Query: 148 ERGTKGIETIVRFTILNTAPTFIEFLLTAIIFWASYGFSYVLVTVVTVWAYIWFTVRASN 207
            RG   ++++    ++   P+ +  L+ A +   SY     L+  +    YI  TV  S 
Sbjct: 137 TRGMWALDSLNDLLLVALLPSIV-MLVGATVVLGSYWPVMGLIVGLGSLIYIGVTVGLSM 195

Query: 208 WRIG-IRRAMNDSDTDANTKAIDSLLNFETVKYFGNEEMEARRFDVAMERYEKSAISIWT 266
             +    R  N  DT       D++     VK FG E  E  R    + +++      W 
Sbjct: 196 GYVSPAARLANAWDTRLGGALADAISCNAVVKAFGAETREETRLGHVLVKWDNRTRRTWK 255

Query: 267 SLGWLNFGQGVIFGIGSTIMMVMSALAV--------QRGEQTIGDFVFVNALLLQLSVPL 318
                   +G + G   + MMV     +        Q+G  T GD  FV A+   L   L
Sbjct: 256 --------RGTLNGTIQSFMMVSMQAGILGTGLIMWQKGLATAGDITFVLAMFFVLQGYL 307

Query: 319 NFIGFVYREIRQGLTDIEQMFDLLEVEAEVTDRPDAKPLAAGPGAISFRDVHFAYDPER- 377
             +G   R +++ + D+E++  L ++   V DRPDAK +  G G I F  V F Y     
Sbjct: 308 RDVGQDIRNLQRAVNDMEELVLLDKMPLGVEDRPDAKRINIGKGEIVFDHVTFQYGAHAT 367

Query: 378 PILKGVSFDVPAGKTVAIVGPSGAGKSTISRLLYRFYDIQEGAVTIDGQDIRDVTQKSLR 437
           P+ +  S  +  G+ V +VG SG+GK+T  +L+ R YDI+ GA+ IDGQ+I DVTQ SLR
Sbjct: 368 PLYEDFSVTIKPGERVGLVGHSGSGKTTFVKLIQRLYDIKAGAIRIDGQNIADVTQASLR 427

Query: 438 SMIGMVPQDTVLFNDTLAYNIRYGRPSATDEELKAAADAAQISAFIGKLPDGYATMVGER 497
             I +V Q+ +LF+ TLA NI YGRP A+  E++ AA  A    FI  LP GY TMVGER
Sbjct: 428 GQIAIVQQEPILFHRTLAENIAYGRPDASRREIEQAAKQASAHDFIMSLPKGYETMVGER 487

Query: 498 GLKLSGGEKQRVAIARTILKAPPILILDEATSALDTHTEQEIQSALDIVSKNRTTLVIAH 557
           G+KLSGGE+QRVAIAR  L   P+LILDEATS+LD+ +E +IQ A++ +   RTTLVIAH
Sbjct: 488 GVKLSGGERQRVAIARAFLADAPVLILDEATSSLDSESEVQIQQAMERLMDGRTTLVIAH 547

Query: 558 RLSTVIHADEIIVLKEGLIAERGTHASLM-AHDGLYASMWSRQ 599
           RLSTV   D ++V  +G I E G H +L+  HDG+Y  ++ RQ
Sbjct: 548 RLSTVRALDRLLVFDKGRIVEEGDHQALIRLHDGIYRRLFERQ 590