Pairwise Alignments

Query, 430 a.a., two component response regulator from Agrobacterium fabrum C58

Subject, 645 a.a., GGDEF domain protein from Pseudomonas putida KT2440

 Score =  108 bits (270), Expect = 5e-28
 Identities = 70/168 (41%), Positives = 88/168 (52%), Gaps = 1/168 (0%)

Query: 246 KQLKRLRELAERDHLTGLPNRRSFFERTRALMDVINDNDESGAVAILDIDHFKKINDTLG 305
           + L+  R+ A  D LTGLPNR ++ ER    M    +N    A+AILD+DHFK+IND  G
Sbjct: 476 EHLEEQRQKALLDPLTGLPNRAAWSERVEREMLDWQENGGHLAMAILDLDHFKRINDNYG 535

Query: 306 HDAGDRALKKLAELLQGMCDEQRHIPARLGGEEFAVFLRGLDARAAYAFCEELREQVEKN 365
           H AGD+ LK +A+ L+      R   AR GGEEF + L       A    E LR  VE  
Sbjct: 536 HLAGDKVLKIVADQLRKRL-RGRDFIARFGGEEFVMLLPQTTPAVAAQVAEVLRATVEAC 594

Query: 366 GRQLSGSSLALTISLGVVEIEKGEPFDNQLNAADQLLYLAKANGRNRV 413
                G  + +T S+G+     GE  D  L  AD  LY AK  GRNRV
Sbjct: 595 PFHFKGERVVITTSIGLGAFRSGERSDQVLKRADAALYRAKELGRNRV 642



 Score = 26.9 bits (58), Expect = 0.002
 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 6/43 (13%)

Query: 311 RALKKLAELLQGMCDEQRHIPARLGGEEFAVFLRGLDARAAYA 353
           R LKKLA+ L+G   + R +P  LG       L GL  RA  A
Sbjct: 118 RPLKKLAKKLEGGVAQSRELPPLLGE------LSGLQGRALSA 154