Pairwise Alignments

Query, 272 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

Subject, 256 a.a., Putative aliphatic sulfonates transport permease protein SsuC from Xanthobacter sp. DMC5

 Score =  110 bits (275), Expect = 3e-29
 Identities = 71/242 (29%), Positives = 123/242 (50%), Gaps = 12/242 (4%)

Query: 30  LYTLALFALWEL-----LVYALKMPPTILPSPI--RVGQVIVQYWSPIWKNSLQTLYTTT 82
           L  LAL  LWE      LV A   PP   PS I    G ++      +W N L +L    
Sbjct: 16  LTPLALLGLWEAAARMGLVDARFFPP---PSSIVHTFGALVAS--GELWTNLLASLRRLF 70

Query: 83  LGFAIAVAAGLAIGLFIGWSKTIYAGLYPLMIGFNAIPKVALVPILVIWFGIGTVPAVLT 142
           LG  +     L +GL +G SK + A + PL+     IPK A++P++++ FG+G +  V+ 
Sbjct: 71  LGMLLGGVPALFLGLAMGISKPLRAAIDPLISATYPIPKSAILPLVLLIFGLGEMSKVVM 130

Query: 143 AFLISFFPIVVNVATGLATIEPETEDVLRALGAKKMDIMLKVGIPRSMPYFFGSLKIAIT 202
             L +F+PI++N   G+A I+    DV     A +  +   + +P ++P     +K+A+ 
Sbjct: 131 VALGAFYPILINTVMGVANIDKIYLDVGHNYRASRWQVFRTIALPGALPSIMAGVKLAMG 190

Query: 203 LAFVGSVVSETVASNYGLGNMMSSAQSQFNVPLVFAGLLMLAVEGIAMYAVMAWLEKRMT 262
           +  +   +SE VA++ G+G M+ +A     V  ++ GLL++A+ G     ++  +E+ + 
Sbjct: 191 MGLILIAISEMVAASDGIGYMIWNAWQVLTVDTMYVGLLVIALLGFVFSVILDEIERMLI 250

Query: 263 GW 264
            W
Sbjct: 251 PW 252