Pairwise Alignments

Query, 347 a.a., ABC transporter, substrate binding protein from Agrobacterium fabrum C58

Subject, 323 a.a., taurine ABC transporter periplasmic binding subunit from Pseudomonas putida KT2440

 Score = 51.6 bits (122), Expect = 3e-11
 Identities = 55/218 (25%), Positives = 97/218 (44%), Gaps = 20/218 (9%)

Query: 55  LDKGYFKAEGLDVTIDSGNGSVEAIPRVATGAYQMGF-GDINSVMKFLDEDPSQKIKAVY 113
           +D  Y KA    +     +   + I  VA+G  Q+G+ G          + P +      
Sbjct: 43  VDGDYEKASKASIDWRKFDNGADVITAVASGDVQIGYLGSSPLAAAATRKLPVETFLIAT 102

Query: 114 MVYERPTFAVVGRKSLGVTGDPKSLEGKKLGAP-PPDGAFAQWPAFKQVAGLDDSKIKIE 172
            +      A+V R S+     P+ L GKK+  P    G ++   A K    +D SK++I 
Sbjct: 103 QIGAGE--ALVARDSIK---SPQDLIGKKVAVPFVSTGHYSLLAALKSW-NIDPSKVQIL 156

Query: 173 SIGFPVREPMLAKGDVDAVFGFAFSVILNLKKQGIADDDISTIL----MAEHGLNLYGNA 228
           ++  P       +GD+DA + +  ++       G+A ++   ++    +A+ G   + +A
Sbjct: 157 NLAPPAIIAAWKRGDIDATYVWDPAL-------GVAKENGKVLITSGELAQKGAPTF-DA 208

Query: 229 VLVNTDFAEKNPEAVKGFLKALAKGFADSVKTPEEGVA 266
            +V  DFAEK+P+ VK F K     +AD  K P+  +A
Sbjct: 209 WIVRKDFAEKHPDVVKAFAKVTLDAYADYRKDPKAWLA 246