Pairwise Alignments

Query, 313 a.a., GTP-binding protein, Era family from Agrobacterium fabrum C58

Subject, 487 a.a., GTPase Der from Pseudomonas putida KT2440

 Score = 69.7 bits (169), Expect = 1e-16
 Identities = 46/163 (28%), Positives = 75/163 (46%), Gaps = 4/163 (2%)

Query: 23  VALIGPTNAGKSTLVNRLVGAKVSIVSHKVQTTRAVMRGIAIHKNAQIVFMDTPGIFKPR 82
           +AL+G  N GKST+ NRL   + +IV      TR    G A  +    + +DT GI    
Sbjct: 5   IALVGRPNVGKSTMFNRLTKTRDAIVGDLSGLTRDRQYGDASWQGRSFILIDTGGITGDE 64

Query: 83  RRLDRAMVTSAWGGAKDADLILLLIDSERGLKGDAEAILEGLKDVPQKKILCLNKIDQVK 142
             +D  M   +    ++AD +L L+D+  G+    + I E L+   +  IL  NKID + 
Sbjct: 65  VGMDEKMAEQSLMAIEEADYVLFLVDARAGMTAADQMIAEHLRKRNKAAILVANKIDNID 124

Query: 143 REDLLKLAAAANEKVAFDRTFMISATNGSGCEDLMDYLVETLP 185
            +    +A A    +       ++ + G G   LM+ ++  LP
Sbjct: 125 PD----VARAEFSPMGMGNAIPVAGSQGRGINALMEAVLGHLP 163



 Score = 54.3 bits (129), Expect = 6e-12
 Identities = 42/183 (22%), Positives = 83/183 (45%), Gaps = 6/183 (3%)

Query: 23  VALIGPTNAGKSTLVNRLVGAKVSIVSHKVQTTRAVMRGIAIHKNAQIVFMDTPGIFKP- 81
           +A+IG  N GKSTLVNR++G +  +V  +  TTR  +         +  F+DT G+ K  
Sbjct: 195 IAIIGRPNVGKSTLVNRMLGEERVVVYDEPGTTRDSIYIPFERDGEKYTFIDTAGVRKRG 254

Query: 82  --RRRLDRAMVTSAWGGAKDADLILLLIDSERGLKGDAEAILEGLKDVPQKKILCLNKID 139
                +++  V       KDA++++ ++D+  G+      +L    +  +  ++ LNK D
Sbjct: 255 KIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGFALEAGRAIVIALNKWD 314

Query: 140 QVKREDLLKLAAAANEK---VAFDRTFMISATNGSGCEDLMDYLVETLPEGPWYYPEDQI 196
            ++  +   +      +   V F     ISA +G+G  +L   +          +P  ++
Sbjct: 315 GMEPGERAYVKTELERRLFFVDFADIHFISALHGTGVGNLYKSVQAAFQSAVTRWPTSRL 374

Query: 197 SDL 199
           + +
Sbjct: 375 TQI 377