Pairwise Alignments

Query, 247 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 219 a.a., Pentapeptide repeat family protein from Pseudomonas putida KT2440

 Score = 59.3 bits (142), Expect = 6e-14
 Identities = 42/129 (32%), Positives = 62/129 (48%), Gaps = 5/129 (3%)

Query: 63  SNLDSAMLYGTDFTYTDLRGSSLKGANLEKAKLIRTALGEANLQGANLTKVEAYRSDFSA 122
           +NL  A L   D    +L G+ L+ A+L  A+L    L +A LQGANLT+    +S+   
Sbjct: 45  ANLRGANLANQDLRKMNLAGADLRDADLRHAQLDLANLEKARLQGANLTRASLQQSNLRL 104

Query: 123 ADATNAKFVNAE-----MQRTKFEKTKLDGTDFTKAELGRADFEGASLNGSKFSLTNLSR 177
           AD +N++ V  +      Q  +FEK  L       A L  A  + A+L  +   +  LS+
Sbjct: 105 ADLSNSRLVAIQGWGLFAQGAQFEKADLRAAYLQFARLSGAKLQQANLQAADLEMAWLSK 164

Query: 178 ARFGGATLG 186
           A    A LG
Sbjct: 165 ADLQEANLG 173



 Score = 56.2 bits (134), Expect = 5e-13
 Identities = 46/179 (25%), Positives = 71/179 (39%), Gaps = 25/179 (13%)

Query: 16  GAAVAAGVVLAVVSLSGGPLGAASCRTDAMAGIDWRECNKRMLMLGSSNLDSAMLYGTDF 75
           G  +A        +L G  L     R   +AG D R+ + R   L  +NL+ A L G + 
Sbjct: 33  GCVIAEASQCPGANLRGANLANQDLRKMNLAGADLRDADLRHAQLDLANLEKARLQGANL 92

Query: 76  TYTDLRGSSLKGANLEKAKLIR-------------------------TALGEANLQGANL 110
           T   L+ S+L+ A+L  ++L+                            L  A LQ ANL
Sbjct: 93  TRASLQQSNLRLADLSNSRLVAIQGWGLFAQGAQFEKADLRAAYLQFARLSGAKLQQANL 152

Query: 111 TKVEAYRSDFSAADATNAKFVNAEMQRTKFEKTKLDGTDFTKAELGRADFEGASLNGSK 169
              +   +  S AD   A   +A +Q  KF ++ L   D   A     +F+ A++ G K
Sbjct: 153 QAADLEMAWLSKADLQEANLGDANLQEAKFGQSNLAHADLRGARQHYGNFQEANMEGCK 211



 Score = 41.2 bits (95), Expect = 2e-08
 Identities = 31/116 (26%), Positives = 45/116 (38%), Gaps = 20/116 (17%)

Query: 83  SSLKGANLEKAKLIRTALGEANLQGANLTKVEAYRSDFSAADATNAKFVNAEMQRTKFEK 142
           S   GANL  A L    L + NL GA+L   +   +    A+   A+   A + R   ++
Sbjct: 40  SQCPGANLRGANLANQDLRKMNLAGADLRDADLRHAQLDLANLEKARLQGANLTRASLQQ 99

Query: 143 TKL--------------------DGTDFTKAELGRADFEGASLNGSKFSLTNLSRA 178
           + L                     G  F KA+L  A  + A L+G+K    NL  A
Sbjct: 100 SNLRLADLSNSRLVAIQGWGLFAQGAQFEKADLRAAYLQFARLSGAKLQQANLQAA 155



 Score = 27.7 bits (60), Expect = 2e-04
 Identities = 16/57 (28%), Positives = 24/57 (42%)

Query: 122 AADATNAKFVNAEMQRTKFEKTKLDGTDFTKAELGRADFEGASLNGSKFSLTNLSRA 178
           A+    A    A +      K  L G D   A+L  A  + A+L  ++    NL+RA
Sbjct: 39  ASQCPGANLRGANLANQDLRKMNLAGADLRDADLRHAQLDLANLEKARLQGANLTRA 95