Pairwise Alignments

Query, 301 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 381 a.a., GGDEF domain protein from Pseudomonas putida KT2440

 Score =  108 bits (271), Expect = 1e-28
 Identities = 72/216 (33%), Positives = 114/216 (52%), Gaps = 20/216 (9%)

Query: 98  WMLTTETTLPGGWMLCVIT----------DVSELGIELRDLRQERDRALKSAL----SDE 143
           W+L   +TL  G  L V+            +S        L+ E  RA + A+    +DE
Sbjct: 157 WLLLQPSTLQQGIALAVLVFAWFVVSATQSLSSALTTAWRLKHEMQRAHRLAMVASCTDE 216

Query: 144 LTGLGNRRYAMDTLN--HLLGPNKAQALAVIIMDIDHFKSVNDRFGHAYGDLVLKDFAAR 201
           LTGL NRR   D  +  H+   +    +AV+++D+DHFK +ND FGHA GD VL+   A 
Sbjct: 217 LTGLNNRRAFFDNASAQHVRCRDAGTFMAVLMLDVDHFKQINDTFGHAAGDQVLQRIGAA 276

Query: 202 LSATAGRDDLLGRIGGEEFLLVLSGSRMHSADSLMRQLLSSLAQASPLGDRPDFRYSCSA 261
           +SA+   +D+ GR+GGEEF ++L  +   +A  +  +L + +A+     + P    + S 
Sbjct: 277 ISASLRDNDIAGRLGGEEFAILLPNTPPDTAIEVAERLRALIAKLRVNDEHP---VTASI 333

Query: 262 GIAYAN-PGESASEVLRHADTALYEAKNTGRNRYVI 296
           G+A+A  P      +L  AD+A+Y +K +GRNR  +
Sbjct: 334 GLAFAKAPATELGALLSSADSAMYLSKVSGRNRVTV 369