Pairwise Alignments

Query, 469 a.a., two component sensor kinase from Agrobacterium fabrum C58

Subject, 466 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  116 bits (290), Expect = 2e-30
 Identities = 124/460 (26%), Positives = 205/460 (44%), Gaps = 51/460 (11%)

Query: 10  STAVRLSALYILL-FALCAAFLVFYVTALSERLLNQQTRDAVLQEVSDVQRIYNRGGINP 68
           S  +RL+ ++ LL FAL A   V     L ER L  +   A++  +  ++ + N      
Sbjct: 8   SLTLRLALIFALLAFALLATLGVALYREL-ERELIMRDDAALIYRIDQLRNLLNDSNTLD 66

Query: 69  LLR--------MMERRARQ-----PGASLYIIAGPNGEILAGNVASVQP----------G 105
           L++        M+  R        PG    +   P G I   N+ SV P           
Sbjct: 67  LIKTKPELFQNMLGNRESALSIAAPGQQPLLTVNP-GNI---NLPSVPPVPKNHKLTFAD 122

Query: 106 VFDKEGWTGFPFRYERYS-ESGDSVQHLATANVFMLDNGLRILIGRDLGEPTKFRALVRN 164
           V    G  G PF     S +SGD                L++  GR + E T   A  R 
Sbjct: 123 VHHFPGINGVPFATVAASIDSGDL-------------GSLQVTTGRLMTERTAVLASYRL 169

Query: 165 ALMVALAIMSGGALLIWFGIGRNALKRIDRMSAATKRIIAGDLSQRLPQGRSGDEFDRLS 224
           ++ V  +I +    ++ + +    L  + R++   + I  G+L++RL    +  E   + 
Sbjct: 170 SVYVLASIAAIILAVVGYLLVHRGLLPLRRLARHAQGIGVGNLAERLDSHGAPKELLPMI 229

Query: 225 GSLNAMLGRIEKLNEGLRQVSDNIAHDLKTPLTRLRNKAAAALDDNDETKR-RAALEGII 283
            S N ML R+ K    L QVS ++AH+L+TP+  L  +   AL  N   +  +  L   +
Sbjct: 230 DSFNTMLERLAKGFVQLGQVSTDMAHELRTPINNLLGETQVALQQNRSIESYQQLLASNV 289

Query: 284 AESDQLIRTFNALLMISRVEAGSIAAEMTDVDMSAIAADSAELYEPVAEDAGLALESQIE 343
            E ++L R  + +L ++R +  S   +  +++ +      AE +E +A D  +++ +  E
Sbjct: 290 EELERLARMLDNMLFLARTDPASALRQRQELNAADEVERIAEYFEGLAGDVDISIHA--E 347

Query: 344 PGLSVQGNRELIGQALSNLIDNAMKYACEGEGDKKLVVRLVKEPEAIVLSVADHGPGIPA 403
               +     L+ +AL+NL  NA+KY   G     L +R V   E I L V++ G  I A
Sbjct: 348 GDGVIWAEPMLLRRALANLCANAIKYGAPG---TVLQIRAVPSAEGIHLRVSNRGETIAA 404

Query: 404 DKRGEVLKRFVRLDES--RSKPGTGLGLSLVEAVMELHGG 441
           +   ++ +RF R+DES  RS    GLGLS+V  +M+LH G
Sbjct: 405 EHLPQLFERFYRVDESRERSAQSNGLGLSIVATIMQLHNG 444