Pairwise Alignments

Query, 523 a.a., serine protease DO-like protease from Agrobacterium fabrum C58

Subject, 492 a.a., putative periplasmic serine endoprotease DegP-like from Pseudomonas putida KT2440

 Score =  326 bits (835), Expect = 1e-93
 Identities = 184/451 (40%), Positives = 269/451 (59%), Gaps = 34/451 (7%)

Query: 56  VPSFANVVDAVSPAVVSVRVQSNVQPASDDSSNFSFNFGGRGLDQLPDDHPLKRFFKEFG 115
           +P F  +V+  SPAVV++  +  + P    ++N           Q+PD   L   F+EF 
Sbjct: 46  LPDFTTLVEQASPAVVNISTKQKL-PDRRIAAN-----------QMPDLEGLPPMFREFF 93

Query: 116 GQNQDRSDRGPNRHRDGKGPLRPVAQGSGFFISEDGYVVTNNHVVDDGSAYTVVMNDGTE 175
            +N  +  R P   R  +      + GSGF IS DGYV+TNNHVV D     V ++D +E
Sbjct: 94  ERNMPQQPRSPRGDRQREAQ----SLGSGFIISSDGYVLTNNHVVADADEIIVRLSDRSE 149

Query: 176 LEAKLVGRDPRTDLALLKVDVNRKFTYVKFADDTKIRVGDWVVAVGNPFGLGGTVTSGII 235
           L+AKLVG DPRTD+ALLKVD  +    VK  D  K++VG+WV+A+G+PFG   +VT GI+
Sbjct: 150 LQAKLVGTDPRTDVALLKVD-GKNLPTVKLGDSEKLKVGEWVLAIGSPFGFDHSVTKGIV 208

Query: 236 SARGRDIGSGPYDDYLQIDAAVNRGNSGGPAFNLNGEVVGINTAIFSPSGGNVGIAFAIP 295
           SA+GR + +  Y  ++Q D A+N GNSGGP FN+ GEVVGIN+ IF+ SGG +G++FAIP
Sbjct: 209 SAKGRTLPNDTYVPFIQTDVAINPGNSGGPLFNMKGEVVGINSQIFTRSGGFMGLSFAIP 268

Query: 296 SSVAKDVIADLQKDGKVERGWLGVQIQPVSKDIAESLGLAEAKGALVVSPQSGSPGDKAG 355
             VA DV   L+KDGKV RGWLGV IQ V+KD+AES GL +  GALV       P  K G
Sbjct: 269 IDVAIDVSNQLKKDGKVSRGWLGVVIQEVNKDLAESFGLDKPAGALVAQVLENGPAAKGG 328

Query: 356 IKQGDIITAVNGDPVKDARDLSRRIGGMAPNSKVEISLWRGGKSQSVTVTLGDLTSDEAS 415
           ++ GD+I ++NG P+  + DL   +GG+    K ++ + R GK Q++ +++G L  D+  
Sbjct: 329 LQVGDVILSMNGQPIVMSADLPHLVGGLKDGEKAKLEIIRNGKRQNLDISVGALPDDDV- 387

Query: 416 KATPSQNDDKGGSQSSSEKVLSSLGLTVS--------PSDDGNGLAITDVDPDSDAAARG 467
                  D   G++ S+E+  + LG++V+          +   G+ I +V  D  AA  G
Sbjct: 388 -------DIGAGTEGSAERSSNRLGVSVADLTAEQKKSLELKGGVVIKEVQ-DGPAAMIG 439

Query: 468 LKTGEKITSVNNQQVASAADIEKILEQAKKD 498
           L+ G+ I+ +NNQ + SA +  +I ++  K+
Sbjct: 440 LRPGDVISHLNNQAIGSAKEFTEIAKELPKN 470



 Score = 42.7 bits (99), Expect = 3e-08
 Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 5/110 (4%)

Query: 301 DVIADLQKDGKVERGW--LGVQIQPVSKDIAESLGLAEAKGALVVSPQSGSPGDKAGIKQ 358
           DV      +G  ER    LGV +  ++ +  +SL   E KG +V+      P    G++ 
Sbjct: 386 DVDIGAGTEGSAERSSNRLGVSVADLTAEQKKSL---ELKGGVVIKEVQDGPAAMIGLRP 442

Query: 359 GDIITAVNGDPVKDARDLSRRIGGMAPNSKVEISLWRGGKSQSVTVTLGD 408
           GD+I+ +N   +  A++ +     +  N  V + + R G++  +T  L +
Sbjct: 443 GDVISHLNNQAIGSAKEFTEIAKELPKNRSVSMRVLRQGRASFITFKLAE 492



 Score = 31.2 bits (69), Expect = 9e-05
 Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 5/74 (6%)

Query: 429 QSSSEKVLSSLGLTVSPSDDGNGLAITDVDPDSDAAARGLKTGEKITSVNNQQVASAADI 488
           Q  ++ +  S GL     D   G  +  V  +  AA  GL+ G+ I S+N Q +  +AD+
Sbjct: 295 QEVNKDLAESFGL-----DKPAGALVAQVLENGPAAKGGLQVGDVILSMNGQPIVMSADL 349

Query: 489 EKILEQAKKDGRSK 502
             ++   K   ++K
Sbjct: 350 PHLVGGLKDGEKAK 363