Pairwise Alignments

Query, 388 a.a., phage head portal protein from Agrobacterium fabrum C58

Subject, 423 a.a., Phage portal protein, HK97 family from Pseudomonas putida KT2440

 Score = 63.9 bits (154), Expect = 8e-15
 Identities = 77/313 (24%), Positives = 136/313 (43%), Gaps = 28/313 (8%)

Query: 35  GGPAFW-----SGRSYAALA--REGFMKNPVAHRAARMVAETSAAVSWLIY----DGDEE 83
           GG +FW     S RS A +    +  +   V      ++AE+   +   +Y    DG  E
Sbjct: 17  GGSSFWRRGVGSSRSAAGVTVTPDSALAITVLQTCVTLLAESVGQLPLELYRRLGDGKRE 76

Query: 84  LAD-HPLLALLS-QPSAHMGGPDFFEALYGHLMLSGNAY--IEPLMIGGRLRELHLLRPD 139
            A  HPL  +L  QP+      ++ E+    L L GN Y  IE     G ++ L+ LR +
Sbjct: 77  SATAHPLYDVLRYQPNPWQTPYEYRESGQLALGLRGNCYSFIER-NDDGSVKALYPLRNE 135

Query: 140 RVSIVEGPDGWPVAYEYRAEGRAARRIAAERDGLGLLHLKLFHPLDDRVGFAPLASAGAA 199
           +V++++G D  PV   YR  G        +   + L+H   +H  +   G +P+     A
Sbjct: 136 KVTVLKGGDLLPV---YRVGGH-------DPLPMRLIHHVRWHTKNHYTGLSPVELHADA 185

Query: 200 LDLHNAASHWNKRLLDNSARPSGALVYQPKEGGNLSTEQ-YDRLKRELEEGYQGAMNAGR 258
           + L  A   +  +   N    SG ++ +PKE   +  +   DR+  +    + G  NA +
Sbjct: 186 VGLAQAVRQYAGKSFANGTAVSG-VIERPKEAPPIKEQSSIDRILDQWGNKFSGIDNAKK 244

Query: 259 PLLLEGGLDWKAMGLSPRDMDFLEARNGAARDIALSLGVPPMLIGIPGDNTYANYQEANR 318
             +L+ G+ +KA+ ++  D + L        DIA    +PP +I      +Y + ++   
Sbjct: 245 VAMLQEGMTFKAVSMNNVDAELLGILKATGLDIARIYKIPPHMINELEKASYNSLEQLLI 304

Query: 319 AFYRLTVLPLVYR 331
            +    ++P V R
Sbjct: 305 QYVIFALMPWVKR 317