Pairwise Alignments

Query, 757 a.a., penicillin binding protein from Agrobacterium fabrum C58

Subject, 774 a.a., penicillin-binding protein from Pseudomonas simiae WCS417

 Score =  249 bits (635), Expect = 5e-70
 Identities = 180/542 (33%), Positives = 268/542 (49%), Gaps = 30/542 (5%)

Query: 146 VPIDQMPDHFIKAVLATEDRRFFDHFGIDFIGLARAMSENARAGGVVQGGSTLTQQLAKN 205
           + +DQ+P + ++ ++A EDR F+ H+G+    +ARA+  N   G + QGGSTLTQQL KN
Sbjct: 171 IKLDQVPPYLLETLVAVEDRDFYHHWGVSPKSIARAVWVNTSGGKMTQGGSTLTQQLVKN 230

Query: 206 LFLTNERSLERKIKEAFLALWLESNMSKKEILSLYLDRAYMG----GGTFGAAAAAQFYF 261
            +LTNERSL RK+ EA +A+ LE + SK+EIL  YL+  ++G        G   A+QF+F
Sbjct: 231 FYLTNERSLTRKLTEAMMAMLLELHYSKQEILEAYLNEVFVGQDGQRAVHGFGLASQFFF 290

Query: 262 GKNLTDVTLSESAILAGLFKAPAKYAPHVNLPAARARANTVLSNLVQSGLMTEGQVIGAR 321
           G+ L+++ L + A+L G+ K P+ Y P  N   A  R N VL  L Q G+ T  QV  A+
Sbjct: 291 GQPLSELKLHQVALLVGMVKGPSYYNPRRNPERALERRNLVLDVLEQQGVATAEQVAAAK 350

Query: 322 RNPATVIDR---ADVKAPDYFLDWAFDEVQRLAAEGKFKDHTVVVRTTIDTGLQQAAEQA 378
           + P  V  R   AD   P  F+D    +++    +    +  + + T+ D  LQ  AE +
Sbjct: 351 KMPLGVTTRGKLADSSFPG-FIDLVKRQLREDYRDEDLTEEGLRIFTSFDPILQMKAEAS 409

Query: 379 MEMELREY--GEGYRVKQGAMVMIE-NGGGVRAMVGGRDYGESQFNRATAALRQPGSSFK 435
           +    +     +G    + AMV+     G V+AM+G R    + FNRA  A+R  GS  K
Sbjct: 410 VNDTFKRLTGRKGSDEVEAAMVVTNPETGEVQAMIGSRQASFAGFNRALDAVRPIGSLVK 469

Query: 436 VYTYSAAMEKGMK--PDTLISDAPVTWRG-----WSPQNYGRSYAGKVTLQVALAKSYNT 488
              Y  A+EK  K    + +SD P++ +G     W+PQN+ R   G V L   +A SYN 
Sbjct: 470 PAVYLTALEKPSKYTLTSWLSDDPLSVKGGDGQVWTPQNFDRRSHGTVFLYQGIAHSYNI 529

Query: 489 VPVRLAKDVLGTQVIVDTAKAMGVATPLRSDKTIPLGTSEVTVLDQATAYAVFPADGMQS 548
              RL  +V G   ++ T   +GV     +  +I LG   +T ++ AT Y      G  +
Sbjct: 530 STSRLGLEV-GVPNVLKTIARLGVTREFPAFPSILLGAGAMTPMEVATMYQTLANGGFNT 588

Query: 549 RRHGIEQVMDYEGNVLYDFSHDEPPAKRVLSEEANS--KMNQMLVTIPVMGTARR--GAL 604
              GI  V+  EG  L  +     P +     +A S   +   +  +   GT R     L
Sbjct: 589 PMRGIRSVLTAEGEPLKRY-----PFQIQQRFDAGSIYLIQNAMQRVMREGTGRSVYSVL 643

Query: 605 DNGIVSGGKTGTSQAYRDAWYVGFTGNYTTAVWFGNDE--FTPMNNMTGGALPAMTYKRL 662
              +   GKTGTS   RD+W+ GF  +    VW G D+   TP    TG      ++ R 
Sbjct: 644 PANLTLAGKTGTSNDSRDSWFAGFGQDVLAVVWLGRDDNGKTPFTGATGALQVWTSFMRK 703

Query: 663 MD 664
            D
Sbjct: 704 AD 705